RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 Q8N1Y9 231 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 ARRDC4Q8NCT1 418 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 BTN2A2Q8WVV5 523 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 DIO2Q92813 273 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 TMEM169Q96HH4 297 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 CLIC6Q96NY7 704 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 ZNF747Q9BV97 191 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 VPS11Q9H270 941 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 CROTQ9UKG9 612 aa7.81□□□□□ -1.16
PTPRK-220ENST00000531466 SCAMP3O14828 347 aaKnown RBP7.8□□□□□ -1.16
PTPRK-220ENST00000531466 RECKO95980 971 aa7.8□□□□□ -1.16
PTPRK-220ENST00000531466 ACVRL1P37023 503 aa7.8□□□□□ -1.16
PTPRK-220ENST00000531466 METTL16Q86W50 562 aaKnown RBP7.8□□□□□ -1.16
PTPRK-220ENST00000531466 KBTBD2Q8IY47 623 aa7.8□□□□□ -1.16
PTPRK-220ENST00000531466 TOE1Q96GM8 510 aaKnown RBP7.8□□□□□ -1.16
PTPRK-220ENST00000531466 CDK5RAP1Q96SZ6 601 aaKnown RBP7.8□□□□□ -1.16
PTPRK-220ENST00000531466 PTPN18Q99952 460 aa7.8□□□□□ -1.16
PTPRK-220ENST00000531466 DEF6Q9H4E7 631 aa7.8□□□□□ -1.16
PTPRK-220ENST00000531466 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
PTPRK-220ENST00000531466 COA3Q9Y2R0 106 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-220ENST00000531466 TBX1O43435 398 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 MYO1BO43795 1136 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 ECI1P42126 302 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 ZNF143P52747 638 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-220ENST00000531466 EPHB4P54760 987 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 PPP2CBP62714 309 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 PPP2CAP67775 309 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 ARHGEF18Q6ZSZ5 1173 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 DNERQ8NFT8 737 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 ZCCHC14Q8WYQ9 949 aaKnown RBP7.79□□□□□ -1.16
PTPRK-220ENST00000531466 DTLQ9NZJ0 730 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 PCDHB4Q9Y5E5 795 aa7.79□□□□□ -1.16
PTPRK-220ENST00000531466 CYR61O00622 381 aa7.78□□□□□ -1.16
PTPRK-220ENST00000531466 HGSO14964 777 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-220ENST00000531466 MEFVO15553 781 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-220ENST00000531466 AMHP03971 560 aa7.78□□□□□ -1.16
PTPRK-220ENST00000531466 E4F1Q66K89 784 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-220ENST00000531466 PKN3Q6P5Z2 889 aa7.78□□□□□ -1.16
PTPRK-220ENST00000531466 TEPPQ6URK8 271 aa7.78□□□□□ -1.16
PTPRK-220ENST00000531466 TCRBV5S2A0A599 114 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 FZD7O75084 574 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 SNRPB2P08579 225 aaKnown RBP7.77□□□□□ -1.17
PTPRK-220ENST00000531466 GJA8P48165 433 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 GTF2A2P52657 109 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 KCNAB2Q13303 367 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 NCAPHQ15003 741 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 STEAP3Q658P3 488 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 TMC5Q6UXY8 1006 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 RCBTB1Q8NDN9 531 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 MENTQ9BUN1 341 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 FTSJ1Q9UET6 329 aa7.77□□□□□ -1.17
PTPRK-220ENST00000531466 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
PTPRK-220ENST00000531466 B4GALT4O60513 344 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 LRG1P02750 347 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 CHRNA2Q15822 529 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 PRSS53Q2L4Q9 553 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 TRMT10BQ6PF06 316 aaKnown RBP7.76□□□□□ -1.17
PTPRK-220ENST00000531466 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 WASF3Q9UPY6 502 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 ZDHHC9Q9Y397 364 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 PCDHA2Q9Y5H9 948 aa7.76□□□□□ -1.17
PTPRK-220ENST00000531466 CYP7B1O75881 506 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 ITGAVP06756 1048 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 LCP1P13796 627 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 SELENOPP49908 381 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 SF1Q15637 639 aaKnown RBP7.75□□□□□ -1.17
PTPRK-220ENST00000531466 SPDYAQ5MJ70 313 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 USP51Q70EK9 711 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 KREMEN2Q8NCW0 462 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 TMEM209Q96SK2 561 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 RBPJLQ9UBG7 517 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 TCAF1Q9Y4C2 921 aa7.75□□□□□ -1.17
PTPRK-220ENST00000531466 TADA3O75528 432 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 HOXC12P31275 282 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 KCNJ6P48051 423 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 NFATC3Q12968 1075 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
PTPRK-220ENST00000531466 SLFN13Q68D06 897 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 ZNF227Q86WZ6 799 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 NT5DC4Q86YG4 428 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 PPIL6Q8IXY8 311 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 KLHL36Q8N4N3 616 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 CLDND1Q9NY35 253 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 HS3ST3A1Q9Y663 406 aa7.74□□□□□ -1.17
PTPRK-220ENST00000531466 PATE3B3GLJ2 98 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 H7BY64 318 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 MUSKO15146 869 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 LSAMPQ13449 338 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 SV2CQ496J9 727 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 EMC4Q5J8M3 183 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 PHF19Q5T6S3 580 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 WRNIP1Q96S55 665 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 MEGF9Q9H1U4 602 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 BARX1Q9HBU1 254 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-220ENST00000531466 LRP2BPQ9P2M1 347 aa7.73□□□□□ -1.17
PTPRK-220ENST00000531466 ZNF623O75123 536 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 SCG5P05408 212 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 LTBRP36941 435 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms