RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SP2Q02086 613 aa25.72■■□□□ 1.71
TRAPPC4-210ENST00000531290 HSDL1Q3SXM5 330 aa25.72■■□□□ 1.71
TRAPPC4-210ENST00000531290 PPP2R2DQ66LE6 453 aa25.72■■□□□ 1.71
TRAPPC4-210ENST00000531290 CREB3L3Q68CJ9 461 aa25.72■■□□□ 1.71
TRAPPC4-210ENST00000531290 HAS3O00219 553 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 SH2B2O14492 632 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 STAM2O75886 525 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 CALM1P0DP23 149 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 CALM2P0DP24 149 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 CALM3P0DP25 149 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 HOXD8P13378 290 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 SELPP16109 830 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 UBA1P22314 1058 aaKnown RBP25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 SMARCC2Q8TAQ2 1214 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 PHOSPHO2Q8TCD6 241 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 CTAGE1Q96RT6 745 aa25.71■■□□□ 1.71
TRAPPC4-210ENST00000531290 PARNO95453 639 aaKnown RBP25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 MYOGP15173 224 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 IGFBP4P22692 258 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 LIFRP42702 1097 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 NECTIN1Q15223 517 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 LRRC8DQ7L1W4 858 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 PPM1EQ8WY54 764 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 SLC9A7Q96T83 725 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 SLC12A7Q9Y666 1083 aa25.7■■□□□ 1.7
TRAPPC4-210ENST00000531290 SCN10AQ9Y5Y9 1956 aa25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 PTK7Q13308 1070 aa25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 BMP2KLQ5H9B9 411 aa25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 RNF20Q5VTR2 975 aa25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 CENPQQ7L2Z9 268 aaPredicted RBP25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 SRBD1Q8N5C6 995 aaKnown RBP25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 GPKOWQ92917 476 aaPredicted RBP eCLIP25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 RTEL1Q9NZ71 1219 aa25.69■■□□□ 1.7
TRAPPC4-210ENST00000531290 EYSQ5T1H1 3165 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 KIF28PB7ZC32 967 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 NOP56O00567 594 aaKnown RBP25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 BAIAP3O94812 1187 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 PLEKHA8P1O95397 391 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 CKBP12277 381 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 MRPS9P82933 396 aaKnown RBP25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 NEDD9Q14511 834 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 USP17L6PQ6QN14 398 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 USP38Q8NB14 1042 aa25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 DHX38Q92620 1227 aaKnown RBP25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 INPP4AQ96PE3 977 aaPredicted RBP25.68■■□□□ 1.7
TRAPPC4-210ENST00000531290 SPATA31C2B4DYI2 1134 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 RXRAP19793 462 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 ICAM3P32942 547 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 KCNJ6P48051 423 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 RBL2Q08999 1139 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 ADGRE1Q14246 886 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 XRRA1Q6P2D8 792 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 SYNE3Q6ZMZ3 975 aa25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 CMTR1Q8N1G2 835 aaKnown RBP25.67■■□□□ 1.7
TRAPPC4-210ENST00000531290 FRMPD4Q14CM0 1322 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 PIK3CDO00329 1044 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 FIBPO43427 364 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 NEFLP07196 543 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 HERC6Q8IVU3 1022 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 C16orf70Q9BSU1 422 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 LRRC2Q9BYS8 371 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 PSTPIP2Q9H939 334 aa25.66■■□□□ 1.7
TRAPPC4-210ENST00000531290 H3BRB1 525 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 MEIS2O14770 477 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 CA3P07451 260 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 ZNF200P98182 395 aaPredicted RBP25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 PCNX4Q63HM2 1172 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 METTL7BQ6UX53 244 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 CYFIP1Q7L576 1253 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 NLRX1Q86UT6 975 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 RAB11FIP4Q86YS3 637 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 CCDC82Q8N4S0 544 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 FANCBQ8NB91 859 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 USP26Q9BXU7 913 aa25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 TUT1Q9H6E5 874 aaKnown RBP25.65■■□□□ 1.7
TRAPPC4-210ENST00000531290 COL9A3Q14050 684 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC4-210ENST00000531290 GPNMBQ14956 572 aa25.64■■□□□ 1.7
TRAPPC4-210ENST00000531290 CCDC85BQ15834 202 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC4-210ENST00000531290 CNKSR3Q6P9H4 555 aa25.64■■□□□ 1.7
TRAPPC4-210ENST00000531290 SYMPKQ92797 1274 aaKnown RBP25.64■■□□□ 1.7
TRAPPC4-210ENST00000531290 BCAS3Q9H6U6 928 aa25.64■■□□□ 1.7
TRAPPC4-210ENST00000531290 C17orf102A2RUQ5 167 aa25.63■■□□□ 1.69
TRAPPC4-210ENST00000531290 CXCL10P02778 98 aa25.63■■□□□ 1.69
TRAPPC4-210ENST00000531290 LGALS2P05162 132 aa25.63■■□□□ 1.69
TRAPPC4-210ENST00000531290 SKAP1Q86WV1 359 aa25.63■■□□□ 1.69
TRAPPC4-210ENST00000531290 NEK1Q96PY6 1258 aa25.63■■□□□ 1.69
TRAPPC4-210ENST00000531290 NBNO60934 754 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 TRIM71Q2Q1W2 868 aaKnown RBP25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 ZNF618Q5T7W0 954 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 TMTC3Q6ZXV5 915 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 SGMS1Q86VZ5 419 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 MICU3Q86XE3 530 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 ATP6V0A1Q93050 837 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 SENP7Q9BQF6 1050 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 ZBED2Q9BTP6 218 aa25.62■■□□□ 1.69
TRAPPC4-210ENST00000531290 PRUNE2Q8WUY3 3088 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 ABHD14A-ACY1A0A1B0GW23 586 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 hCG_1642624A0A1W2PR95 340 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 TLL1O43897 1013 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 THPOP40225 353 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms