RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	RGS20	O76081	388 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	SGPL1	O95470	568 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	SMPD1	P17405	629 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	ITGB5	P18084	799 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	TRAPPC10	P48553	1259 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	BRDT	Q58F21	947 aa	Predicted RBP	24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	PPP4R3A	Q6IN85	833 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	SENP7	Q9BQF6	1050 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	XPNPEP3	Q9NQH7	507 aa		24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	DDX41	Q9UJV9	622 aa	Known RBP	24.19	■■□□□ 1.46
PABPC4-225	ENST00000531243	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	24.18	■■□□□ 1.46
PABPC4-225	ENST00000531243	CCNT1	O60563	726 aa	Known RBP	24.18	■■□□□ 1.46
PABPC4-225	ENST00000531243	GH1	P01241	217 aa		24.18	■■□□□ 1.46
PABPC4-225	ENST00000531243	BRAP	Q7Z569	592 aa		24.18	■■□□□ 1.46
PABPC4-225	ENST00000531243	ARRDC4	Q8NCT1	418 aa		24.18	■■□□□ 1.46
PABPC4-225	ENST00000531243	U2AF1L4	Q8WU68	220 aa	Known RBP	24.18	■■□□□ 1.46
PABPC4-225	ENST00000531243	CYP3A7-CYP3A51P	A0A087WV96	503 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	FAM86B1	E9PN63	330 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	TFRC	P02786	760 aa	Known RBP	24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	FAM86B2	P0C5J1	330 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	CYP3A7	P24462	503 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	GJA8	P48165	433 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	LY6K	Q17RY6	165 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243		Q4G0T1	1027 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	PRR16	Q569H4	304 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	CCDC62	Q6P9F0	684 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	RNF180	Q86T96	592 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	TLK2	Q86UE8	772 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	DHX37	Q8IY37	1157 aa	Known RBP	24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	MLXIP	Q9HAP2	919 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	KCNH7	Q9NS40	1196 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	DDX25	Q9UHL0	483 aa	Known RBP	24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	TCEAL9	Q9UHQ7	104 aa		24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	GNE	Q9Y223	722 aa	Known RBP	24.17	■■□□□ 1.46
PABPC4-225	ENST00000531243	DOCK5	Q9H7D0	1870 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	ZEB2	O60315	1214 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	ORC2	Q13416	577 aa	Predicted RBP	24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	LAMC2	Q13753	1193 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	RILPL1	Q5EBL4	403 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	EARS2	Q5JPH6	523 aa	Known RBP	24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	ANO1	Q5XXA6	986 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	LHX8	Q68G74	356 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	OR6J1	Q8NGC5	347 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	SDF4	Q9BRK5	362 aa		24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	24.16	■■□□□ 1.46
PABPC4-225	ENST00000531243	IGLV3-22	A0A075B6J6	115 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	KIF28P	B7ZC32	967 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	DYNC1LI2	O43237	492 aa	Predicted RBP	24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	MARCH6	O60337	910 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	ARIH2	O95376	493 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	CPT1A	P50416	773 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	GJA9	P57773	515 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	CYP2W1	Q8TAV3	490 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	ZNF577	Q9BSK1	485 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	OGDHL	Q9ULD0	1010 aa		24.15	■■□□□ 1.46
PABPC4-225	ENST00000531243	CCDC85C	A6NKD9	419 aa		24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	BAG4	O95429	457 aa	Known RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	GGPS1	O95749	300 aa		24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	C6orf222	P0C671	652 aa	Predicted RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	UBA1	P22314	1058 aa	Known RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	CELF3	Q5SZQ8	465 aa	Known RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	ANKLE1	Q8NAG6	615 aa		24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	PCSK9	Q8NBP7	692 aa	Known RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	EMID1	Q96A84	441 aa	Predicted RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	MBOAT7	Q96N66	472 aa		24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	CRISPLD2	Q9H0B8	497 aa		24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	UPF3A	Q9H1J1	476 aa	Known RBP	24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	TBC1D22B	Q9NU19	505 aa		24.14	■■□□□ 1.45
PABPC4-225	ENST00000531243	NFASC	O94856	1347 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	SYNRG	Q9UMZ2	1314 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	FAM205C	A6NFA0	338 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	KBTBD13	C9JR72	458 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	TDP2	O95551	362 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	AR	P10275	920 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	ATP2B1	P20020	1258 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	TTC38	Q5R3I4	469 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	METTL7B	Q6UX53	244 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	PPP4R3CP	Q6ZMV5	832 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	AGO4	Q9HCK5	861 aa	Known RBP	24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	MTMR6	Q9Y217	621 aa		24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	RBM19	Q9Y4C8	960 aa	Known RBP	24.13	■■□□□ 1.45
PABPC4-225	ENST00000531243	IPO5	O00410	1097 aa	Known RBP	24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	NOP56	O00567	594 aa	Known RBP	24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	TBX3	O15119	743 aa		24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	ADCY6	O43306	1168 aa		24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	MYCN	P04198	464 aa	Predicted RBP	24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	SEMA3F	Q13275	785 aa		24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	TSHZ2	Q9NRE2	1034 aa		24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	MYH15	Q9Y2K3	1946 aa		24.12	■■□□□ 1.45
PABPC4-225	ENST00000531243	KIAA0100	Q14667	2235 aa	Known RBP	24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	ADAMTS4	O75173	837 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	PGK1	P00558	417 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	KCNA2	P16389	499 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	CST5	P28325	142 aa	Predicted RBP	24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	NKX3-2	P78367	333 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	SP2	Q02086	613 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	GNAS	Q5JWF2	1037 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	MYSM1	Q5VVJ2	828 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	CYFIP1	Q7L576	1253 aa		24.11	■■□□□ 1.45
PABPC4-225	ENST00000531243	FERMT3	Q86UX7	667 aa		24.11	■■□□□ 1.45

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms