RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 UBA1P22314 1058 aaKnown RBP24.27■■□□□ 1.48
CAPN1-220ENST00000530567 IRX5P78411 483 aaPredicted RBP24.27■■□□□ 1.48
CAPN1-220ENST00000530567 NIPA1Q7RTP0 329 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 NLRX1Q86UT6 975 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 UPF3AQ9H1J1 476 aaKnown RBP24.27■■□□□ 1.48
CAPN1-220ENST00000530567 XPNPEP3Q9NQH7 507 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 H3BQV1 296 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 CTAGE5O15320 804 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 TDP2O95551 362 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 HSP90AA1P07900 732 aaKnown RBP24.27■■□□□ 1.48
CAPN1-220ENST00000530567 TGFB3P10600 412 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 PDCP20941 246 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 NKX3-2P78367 333 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 MTMR1Q13613 665 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 BECN1Q14457 450 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 IFFO2Q5TF58 517 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 KCNV1Q6PIU1 500 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 NEK8Q86SG6 692 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 TLK2Q86UE8 772 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 NOSTRINQ8IVI9 506 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 SPRYD3Q8NCJ5 442 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 MBOAT7Q96N66 472 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 CYP3A7-CYP3A51PA0A087WV96 503 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 MYADML2A6NDP7 307 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 CCDC85CA6NKD9 419 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 WNT7AO00755 349 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 NKRFO15226 690 aaKnown RBP eCLIP24.26■■□□□ 1.47
CAPN1-220ENST00000530567 PGK1P00558 417 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 ARP10275 920 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 CYP3A7P24462 503 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 ZNF76P36508 570 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 GJA9P57773 515 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 ARHGAP1Q07960 439 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 MOXD1Q6UVY6 613 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 BCAS3Q9H6U6 928 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 KCNH7Q9NS40 1196 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 Q9Y3F1 56 aa24.26■■□□□ 1.47
CAPN1-220ENST00000530567 DOCK5Q9H7D0 1870 aa24.25■■□□□ 1.47
CAPN1-220ENST00000530567 ATP9AO75110 1047 aa24.25■■□□□ 1.47
CAPN1-220ENST00000530567 KCNA2P16389 499 aa24.25■■□□□ 1.47
CAPN1-220ENST00000530567 MNX1P50219 401 aaPredicted RBP24.25■■□□□ 1.47
CAPN1-220ENST00000530567 PLA2G4DQ86XP0 818 aa24.25■■□□□ 1.47
CAPN1-220ENST00000530567 CDHR1Q96JP9 859 aa24.25■■□□□ 1.47
CAPN1-220ENST00000530567 EN2P19622 333 aaPredicted RBP24.24■■□□□ 1.47
CAPN1-220ENST00000530567 SOX10P56693 466 aa24.24■■□□□ 1.47
CAPN1-220ENST00000530567 LETM2Q2VYF4 491 aa24.24■■□□□ 1.47
CAPN1-220ENST00000530567 PRR16Q569H4 304 aa24.24■■□□□ 1.47
CAPN1-220ENST00000530567 KLHDC9Q8NEP7 349 aa24.24■■□□□ 1.47
CAPN1-220ENST00000530567 AGO4Q9HCK5 861 aaKnown RBP24.24■■□□□ 1.47
CAPN1-220ENST00000530567 MAFGO15525 162 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 DYNC1LI2O43237 492 aaPredicted RBP24.23■■□□□ 1.47
CAPN1-220ENST00000530567 GH1P01241 217 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 SETQ01105 290 aaPredicted RBP24.23■■□□□ 1.47
CAPN1-220ENST00000530567 LRRC41Q15345 812 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 CELF3Q5SZQ8 465 aaKnown RBP24.23■■□□□ 1.47
CAPN1-220ENST00000530567 MCTP1Q6DN14 999 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 OR6J1Q8NGC5 347 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 EMID1Q96A84 441 aaPredicted RBP24.23■■□□□ 1.47
CAPN1-220ENST00000530567 SENP7Q9BQF6 1050 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 MTMR6Q9Y217 621 aa24.23■■□□□ 1.47
CAPN1-220ENST00000530567 VPS37CA5D8V6 355 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-220ENST00000530567 SLC37A4O43826 429 aa24.22■■□□□ 1.47
CAPN1-220ENST00000530567 GGPS1O95749 300 aa24.22■■□□□ 1.47
CAPN1-220ENST00000530567 TFRCP02786 760 aaKnown RBP24.22■■□□□ 1.47
CAPN1-220ENST00000530567 CST5P28325 142 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-220ENST00000530567 ITGB3BPQ13352 177 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-220ENST00000530567 GNL2Q13823 731 aaKnown RBP24.22■■□□□ 1.47
CAPN1-220ENST00000530567 Q4G0T1 1027 aa24.22■■□□□ 1.47
CAPN1-220ENST00000530567 MYSM1Q5VVJ2 828 aa24.22■■□□□ 1.47
CAPN1-220ENST00000530567 PPP4R3AQ6IN85 833 aa24.22■■□□□ 1.47
CAPN1-220ENST00000530567 CCSAPQ6IQ19 270 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-220ENST00000530567 PKD2L1Q9P0L9 805 aa24.22■■□□□ 1.47
CAPN1-220ENST00000530567 FARP2O94887 1054 aaPredicted RBP24.21■■□□□ 1.47
CAPN1-220ENST00000530567 C6orf222P0C671 652 aaPredicted RBP24.21■■□□□ 1.47
CAPN1-220ENST00000530567 GCFC2P16383 781 aaKnown RBP24.21■■□□□ 1.47
CAPN1-220ENST00000530567 AP5M1Q9H0R1 490 aa24.21■■□□□ 1.47
CAPN1-220ENST00000530567 TSHZ2Q9NRE2 1034 aa24.21■■□□□ 1.47
CAPN1-220ENST00000530567 STX6O43752 255 aa24.2■■□□□ 1.46
CAPN1-220ENST00000530567 SORBS3O60504 671 aa24.2■■□□□ 1.46
CAPN1-220ENST00000530567 CCNT1O60563 726 aaKnown RBP24.2■■□□□ 1.46
CAPN1-220ENST00000530567 BEX3Q00994 111 aa24.2■■□□□ 1.46
CAPN1-220ENST00000530567 NEDD9Q14511 834 aa24.2■■□□□ 1.46
CAPN1-220ENST00000530567 FSCN1Q16658 493 aaKnown RBP24.2■■□□□ 1.46
CAPN1-220ENST00000530567 METTL7BQ6UX53 244 aa24.2■■□□□ 1.46
CAPN1-220ENST00000530567 DDX25Q9UHL0 483 aaKnown RBP24.2■■□□□ 1.46
CAPN1-220ENST00000530567 TELO2Q9Y4R8 837 aa24.2■■□□□ 1.46
CAPN1-220ENST00000530567 DNM1LO00429 736 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 MSH4O15457 936 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 CAPN2P17655 700 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 TOB1P50616 345 aaPredicted RBP24.19■■□□□ 1.46
CAPN1-220ENST00000530567 LAMC2Q13753 1193 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 CYFIP1Q7L576 1253 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 RNF180Q86T96 592 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 DHX37Q8IY37 1157 aaKnown RBP24.19■■□□□ 1.46
CAPN1-220ENST00000530567 ANKLE1Q8NAG6 615 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 ARRDC4Q8NCT1 418 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 ETNPPLQ8TBG4 499 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 AFG1LQ8WV93 481 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 UIMC1Q96RL1 719 aa24.19■■□□□ 1.46
CAPN1-220ENST00000530567 SPC25Q9HBM1 224 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms