RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 GLI1P08151 1106 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 GLI4P10075 376 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 KCNA6P17658 529 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 KRT15P19012 456 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 RAB3GAP1Q15042 981 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 CHRNA2Q15822 529 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 MPZL3Q6UWV2 235 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 DCP2Q8IU60 420 aaKnown RBP8.38□□□□□ -1.07
VPS26B-205ENST00000530402 PIP4K2CQ8TBX8 421 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 CELF4Q9BZC1 486 aaKnown RBP8.38□□□□□ -1.07
VPS26B-205ENST00000530402 CABP5Q9NP86 173 aa8.38□□□□□ -1.07
VPS26B-205ENST00000530402 ZC3H12DA2A288 527 aaKnown RBP8.37□□□□□ -1.07
VPS26B-205ENST00000530402 WNT9AO14904 365 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 MAFKO60675 156 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 GLRX3O76003 335 aaKnown RBP8.37□□□□□ -1.07
VPS26B-205ENST00000530402 CYBBP04839 570 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 CKMP06732 381 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 DBHP09172 617 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 STAT3P40763 770 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 IRAK1P51617 712 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 PCBP1Q15365 356 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS26B-205ENST00000530402 PTPROQ16827 1216 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 TMEM177Q53S58 311 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 STEAP3Q658P3 488 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 PAQR3Q6TCH7 311 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 OTOP3Q7RTS5 596 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 NETO2Q8NC67 525 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS26B-205ENST00000530402 TNFRSF12AQ9NP84 129 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 CBLCQ9ULV8 474 aa8.37□□□□□ -1.07
VPS26B-205ENST00000530402 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 OR14I1A6ND48 311 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 PDE6AP16499 860 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 NR1I3Q14994 352 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 SART3Q15020 963 aaKnown RBP8.36□□□□□ -1.07
VPS26B-205ENST00000530402 ARHGAP36Q6ZRI8 547 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 DDX46Q7L014 1031 aaKnown RBP8.36□□□□□ -1.07
VPS26B-205ENST00000530402 OSTM1Q86WC4 334 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 C2orf69Q8N8R5 385 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 PEX11GQ96HA9 241 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 SLC6A20Q9NP91 592 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 NUB1Q9Y5A7 615 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 COL4A3BPQ9Y5P4 624 aa8.36□□□□□ -1.07
VPS26B-205ENST00000530402 HGSO14964 777 aaPredicted RBP8.35□□□□□ -1.07
VPS26B-205ENST00000530402 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS26B-205ENST00000530402 VIL1P09327 827 aaKnown RBP8.35□□□□□ -1.07
VPS26B-205ENST00000530402 POU3F2P20265 443 aaPredicted RBP8.35□□□□□ -1.07
VPS26B-205ENST00000530402 TMEM62Q0P6H9 643 aa8.35□□□□□ -1.07
VPS26B-205ENST00000530402 GPR19Q15760 415 aa8.35□□□□□ -1.07
VPS26B-205ENST00000530402 PKN3Q6P5Z2 889 aa8.35□□□□□ -1.07
VPS26B-205ENST00000530402 SEC14L1Q92503 715 aa8.35□□□□□ -1.07
VPS26B-205ENST00000530402 FAM168AQ92567 244 aa8.35□□□□□ -1.07
VPS26B-205ENST00000530402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS26B-205ENST00000530402 DSEQ9UL01 958 aa8.35□□□□□ -1.07
VPS26B-205ENST00000530402 CECR2Q9BXF3 1484 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 SLC6A11P48066 632 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 SCNN1BP51168 640 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 OVCH1Q7RTY7 1134 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 MILR1Q7Z6M3 343 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 RNF180Q86T96 592 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 MTFR1LQ9H019 292 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 ZKSCAN5Q9Y2L8 839 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 UNC13AQ9UPW8 1703 aa8.34□□□□□ -1.07
VPS26B-205ENST00000530402 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 GAS7O60861 476 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 PAPLNO95428 1278 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 JUNBP17275 347 aaPredicted RBP8.33□□□□□ -1.08
VPS26B-205ENST00000530402 JAM2P57087 298 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 NFKB2Q00653 900 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 ANKLE2Q86XL3 938 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 PTRH1Q86Y79 214 aaKnown RBP8.33□□□□□ -1.08
VPS26B-205ENST00000530402 IRF2BP1Q8IU81 584 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 CHST14Q8NCH0 376 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 OR2W6PQ8NHA6 318 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 SMOC1Q9H4F8 434 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 MYOTQ9UBF9 498 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 PALD1Q9ULE6 856 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 PCDHB4Q9Y5E5 795 aa8.33□□□□□ -1.08
VPS26B-205ENST00000530402 FAM83GA6ND36 823 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 CBX4O00257 560 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 ABLIM1O14639 778 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 KCNK3O14649 394 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 SLC27A2O14975 620 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 KRT37O76014 449 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 ZBTB7AO95365 584 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 LACTBP83111 547 aaPredicted RBP8.32□□□□□ -1.08
VPS26B-205ENST00000530402 PRR5P85299 388 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 STRN3Q13033 797 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 OLFML2BQ68BL8 750 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 ZC3H14Q6PJT7 736 aaKnown RBP8.32□□□□□ -1.08
VPS26B-205ENST00000530402 LIN37Q96GY3 246 aaPredicted RBP8.32□□□□□ -1.08
VPS26B-205ENST00000530402 PCDH12Q9NPG4 1184 aa8.32□□□□□ -1.08
VPS26B-205ENST00000530402 SLC12A8A0AV02 714 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 PTPDC1A2A3K4 754 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms