RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 PKN3Q6P5Z2 889 aa8.41□□□□□ -1.06
CASP4-208ENST00000530309 OTOP3Q7RTS5 596 aa8.41□□□□□ -1.06
CASP4-208ENST00000530309 OVCH1Q7RTY7 1134 aa8.41□□□□□ -1.06
CASP4-208ENST00000530309 KIF18BQ86Y91 864 aa8.41□□□□□ -1.06
CASP4-208ENST00000530309 NETO2Q8NC67 525 aa8.41□□□□□ -1.06
CASP4-208ENST00000530309 TNFRSF12AQ9NP84 129 aa8.41□□□□□ -1.06
CASP4-208ENST00000530309 CBX4O00257 560 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 SRGAP3O43295 1099 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 COL6A2P12110 1019 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 PDE6AP16499 860 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 LACTBP83111 547 aaPredicted RBP8.4□□□□□ -1.06
CASP4-208ENST00000530309 HABP4Q5JVS0 413 aaKnown RBP8.4□□□□□ -1.06
CASP4-208ENST00000530309 CISD2Q8N5K1 135 aaKnown RBP8.4□□□□□ -1.06
CASP4-208ENST00000530309 PIP4K2CQ8TBX8 421 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 CABP5Q9NP86 173 aa8.4□□□□□ -1.06
CASP4-208ENST00000530309 hCG_2014768A0A024R1R8 64 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 BIN1O00499 593 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 KRIT1O00522 736 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 CYBBP04839 570 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 SLC6A11P48066 632 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 NFKB2Q00653 900 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 GPR19Q15760 415 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 SEPT7Q16181 437 aaKnown RBP8.39□□□□□ -1.07
CASP4-208ENST00000530309 OSTM1Q86WC4 334 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 AFAP1L2Q8N4X5 818 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 INTS4Q96HW7 963 aaKnown RBP8.39□□□□□ -1.07
CASP4-208ENST00000530309 SLC6A20Q9NP91 592 aa8.39□□□□□ -1.07
CASP4-208ENST00000530309 TRAF5O00463 557 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 NKRFO15226 690 aaKnown RBP eCLIP8.38□□□□□ -1.07
CASP4-208ENST00000530309 MPOP05164 745 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 DBHP09172 617 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
CASP4-208ENST00000530309 MECP2P51608 486 aaKnown RBP8.38□□□□□ -1.07
CASP4-208ENST00000530309 DHCR24Q15392 516 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 STEAP3Q658P3 488 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 PAQR3Q6TCH7 311 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 NBPF11Q86T75 865 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 DCP2Q8IU60 420 aaKnown RBP8.38□□□□□ -1.07
CASP4-208ENST00000530309 ANKRD13AQ8IZ07 590 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 CHST14Q8NCH0 376 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 SEC14L1Q92503 715 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 SLC6A17Q9H1V8 727 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 NUDT5Q9UKK9 219 aa8.38□□□□□ -1.07
CASP4-208ENST00000530309 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 HGSO14964 777 aaPredicted RBP8.37□□□□□ -1.07
CASP4-208ENST00000530309 MAFKO60675 156 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 F2P00734 622 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 AMY2AP04746 511 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 KRT15P19012 456 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 AMY2BP19961 511 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 SDHBP21912 280 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 SCNN1BP51168 640 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 JAM2P57087 298 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 ANAPC15P60006 121 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 IGBP1P78318 339 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 KCNMB1Q16558 191 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 ARHGAP44Q17R89 818 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 EMC4Q5J8M3 183 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 CYP4F22Q6NT55 531 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 STRA8Q7Z7C7 330 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 OR2W6PQ8NHA6 318 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 PEX11GQ96HA9 241 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.37□□□□□ -1.07
CASP4-208ENST00000530309 B4GALT6Q9UBX8 382 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 DSEQ9UL01 958 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 ATP8A1Q9Y2Q0 1164 aa8.37□□□□□ -1.07
CASP4-208ENST00000530309 TCRBV5S4A2TA0A5A2 114 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 TADA3O75528 432 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 GLI1P08151 1106 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 STRN3Q13033 797 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 NR1I3Q14994 352 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 ZSWIM9Q86XI8 627 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 UHMK1Q8TAS1 419 aaKnown RBP8.36□□□□□ -1.07
CASP4-208ENST00000530309 FAM126AQ9BYI3 521 aaPredicted RBP8.36□□□□□ -1.07
CASP4-208ENST00000530309 SMOC1Q9H4F8 434 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 SMURF1Q9HCE7 757 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 ZKSCAN5Q9Y2L8 839 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 NUB1Q9Y5A7 615 aa8.36□□□□□ -1.07
CASP4-208ENST00000530309 ZC3H12DA2A288 527 aaKnown RBP8.35□□□□□ -1.07
CASP4-208ENST00000530309 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
CASP4-208ENST00000530309 PPM1GO15355 546 aaPredicted RBP8.35□□□□□ -1.07
CASP4-208ENST00000530309 CPEP16870 476 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 PDE6BP35913 854 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 RAB3GAP1Q15042 981 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 SKOR2Q2VWA4 1001 aaPredicted RBP8.35□□□□□ -1.07
CASP4-208ENST00000530309 HHIPL2Q6UWX4 724 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 OTOP1Q7RTM1 612 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 PTRH1Q86Y79 214 aaKnown RBP8.35□□□□□ -1.07
CASP4-208ENST00000530309 NXPE1Q8N323 547 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 PHOSPHO1Q8TCT1 267 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 SH3RF2Q8TEC5 729 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 RXFP1Q9HBX9 757 aa8.35□□□□□ -1.07
CASP4-208ENST00000530309 MCM8Q9UJA3 840 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms