RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ADGRG2Q8IZP9 1017 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 SYT8Q8NBV8 401 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 ZBTB8AQ96BR9 441 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 ZFYVE21Q9BQ24 234 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 GORASP1Q9BQQ3 440 aa7.2□□□□□ -1.26
USP47-209ENST00000530041 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
USP47-209ENST00000530041 A0A1B0GTL3 188 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 RBL2Q08999 1139 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 IFRD2Q12894 506 aaPredicted RBP7.19□□□□□ -1.26
USP47-209ENST00000530041 MTERF2Q49AM1 385 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 STYK1Q6J9G0 422 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 FAM26EQ8N5C1 309 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 C11orf84Q9BUA3 381 aaPredicted RBP7.19□□□□□ -1.26
USP47-209ENST00000530041 SPATA6Q9NWH7 488 aaPredicted RBP7.19□□□□□ -1.26
USP47-209ENST00000530041 RTEL1Q9NZ71 1219 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 PCDHB4Q9Y5E5 795 aa7.19□□□□□ -1.26
USP47-209ENST00000530041 TCRBV5S2A0A599 114 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 CCDC85CA6NKD9 419 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 ADCY3O60266 1144 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 RANGAP1P46060 587 aaPredicted RBP7.18□□□□□ -1.26
USP47-209ENST00000530041 CYP4F22Q6NT55 531 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 KCNT2Q6UVM3 1135 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 LBX2Q6XYB7 198 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 DPH6Q7L8W6 267 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 CARFQ8N187 725 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 PHOSPHO1Q8TCT1 267 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 YIPF4Q9BSR8 244 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 JAM3Q9BX67 310 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 SMOC1Q9H4F8 434 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 NTMQ9P121 344 aa7.18□□□□□ -1.26
USP47-209ENST00000530041 BLACEA4D250 179 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 SMARCA5O60264 1052 aaPredicted RBP7.17□□□□□ -1.26
USP47-209ENST00000530041 MAFKO60675 156 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 GPR85P60893 370 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
USP47-209ENST00000530041 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
USP47-209ENST00000530041 SERINC3Q13530 473 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 KIZQ2M2Z5 673 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 CR1LQ2VPA4 569 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 SCUBE1Q8IWY4 988 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 IFNL3Q8IZI9 196 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 ZDHHC14Q8IZN3 488 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 KYQ8NBH2 561 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 ARRDC4Q8NCT1 418 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 TOE1Q96GM8 510 aaKnown RBP7.17□□□□□ -1.26
USP47-209ENST00000530041 SYT3Q9BQG1 590 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 SPATA25Q9BR10 227 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 SLC6A20Q9NP91 592 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 DTLQ9NZJ0 730 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 MYOTQ9UBF9 498 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 PPARGC1AQ9UBK2 798 aaKnown RBP7.17□□□□□ -1.26
USP47-209ENST00000530041 PFDN2Q9UHV9 154 aa7.17□□□□□ -1.26
USP47-209ENST00000530041 KRIT1O00522 736 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 GRK2P25098 689 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 GRK3P35626 688 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 STAT5AP42229 794 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 SARSP49591 514 aaKnown RBP7.16□□□□□ -1.26
USP47-209ENST00000530041 ITGA1P56199 1179 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 NKX3-2P78367 333 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 NFIXQ14938 502 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 LRP10Q7Z4F1 713 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 FRMD5Q7Z6J6 570 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 TTLL6Q8N841 843 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 ZBTB38Q8NAP3 1195 aaPredicted RBP7.16□□□□□ -1.26
USP47-209ENST00000530041 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP47-209ENST00000530041 RELTQ969Z4 430 aa7.16□□□□□ -1.26
USP47-209ENST00000530041 THBS2P35442 1172 aa7.15□□□□□ -1.26
USP47-209ENST00000530041 OTOP3Q7RTS5 596 aa7.15□□□□□ -1.26
USP47-209ENST00000530041 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
USP47-209ENST00000530041 CDC6Q99741 560 aa7.15□□□□□ -1.26
USP47-209ENST00000530041 ASH2LQ9UBL3 628 aa7.15□□□□□ -1.26
USP47-209ENST00000530041 DIAPH1O60610 1272 aaKnown RBP7.14□□□□□ -1.27
USP47-209ENST00000530041 RPL13P26373 211 aaKnown RBP7.14□□□□□ -1.27
USP47-209ENST00000530041 RASA3Q14644 834 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 SF3A1Q15459 793 aaKnown RBP7.14□□□□□ -1.27
USP47-209ENST00000530041 SOGA3Q5TF21 947 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 TEPPQ6URK8 271 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 ASXL2Q76L83 1435 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 STK32CQ86UX6 486 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 TRIM48Q8IWZ4 208 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 TEPSINQ96N21 525 aa7.14□□□□□ -1.27
USP47-209ENST00000530041 TRBV23-1A0A0A0MS06 115 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 SOD2P04179 222 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
USP47-209ENST00000530041 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 LONRF2Q1L5Z9 754 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 FOXB2Q5VYV0 432 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 MAMDC2Q7Z304 686 aaPredicted RBP7.13□□□□□ -1.27
USP47-209ENST00000530041 TTLL11Q8NHH1 800 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 CXorf38Q8TB03 319 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 IPO9Q96P70 1041 aaKnown RBP7.13□□□□□ -1.27
USP47-209ENST00000530041 DEPDC7Q96QD5 511 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 KRTAP4-7Q9BYR0 210 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 HSPBP1Q9NZL4 362 aa7.13□□□□□ -1.27
USP47-209ENST00000530041 KDM2BQ8NHM5 1336 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 FAM47E-STBD1D6RA91 191 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 SLC27A2O14975 620 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 NOBOXO60393 691 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms