RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 DNERQ8NFT8 737 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 USP6NLQ92738 828 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 RMDN3Q96TC7 470 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 ASTN1O14525 1302 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 FOXN1O15353 648 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 USP11P51784 963 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 NSUN6Q8TEA1 469 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 FGD4Q96M96 766 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 MTMR9Q96QG7 549 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 ADD3Q9UEY8 706 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 DDX25Q9UHL0 483 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 RPTORQ8N122 1335 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 A0A087X0B3 334 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 GNRH1P01148 92 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 HOXC6P09630 235 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 ARHGAP4P98171 946 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 ARHGEF16Q5VV41 709 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 DHX58Q96C10 678 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 PXMP2Q9NR77 195 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 SLC5A4Q9NY91 659 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 KIAA1468Q9P260 1216 aa16.25■□□□□ 0.19
TTC39A-216ENST00000530004 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
TTC39A-216ENST00000530004 FRMPD4Q14CM0 1322 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 ACTN4O43707 911 aaKnown RBP16.24■□□□□ 0.19
TTC39A-216ENST00000530004 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
TTC39A-216ENST00000530004 HOXD10P28358 340 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 SREBF1P36956 1147 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 TXLNAP40222 546 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 RGS2P41220 211 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 FLT3LGP49771 235 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 ALDH5A1P51649 535 aaPredicted RBP16.24■□□□□ 0.19
TTC39A-216ENST00000530004 PRKCZQ05513 592 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 NPLOC4Q8TAT6 608 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 CRYGNQ8WXF5 182 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 PDCD2LQ9BRP1 358 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 EHMT1Q9H9B1 1298 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
TTC39A-216ENST00000530004 RBBP6Q7Z6E9 1792 aaKnown RBP16.24■□□□□ 0.19
TTC39A-216ENST00000530004 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 ZNF236Q9UL36 1845 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 CYP3A7-CYP3A51PA0A087WV96 503 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 PP2D1A8MPX8 630 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 EIF2AK2P19525 551 aaKnown RBP16.23■□□□□ 0.19
TTC39A-216ENST00000530004 CYP2B6P20813 491 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 CYP3A7P24462 503 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 CDC25AP30304 524 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 TXKP42681 527 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 UBXN2AP68543 259 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 PNOCQ13519 176 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 PGM5Q15124 567 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-216ENST00000530004 APBA2Q99767 749 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 SRRDQ9UH36 339 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
TTC39A-216ENST00000530004 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 ZSWIM8A7E2V4 1837 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 UBA7P41226 1012 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 TECP42680 631 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 STX1AQ16623 288 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-216ENST00000530004 MAML3Q96JK9 1138 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 AK8Q96MA6 479 aa16.23■□□□□ 0.19
TTC39A-216ENST00000530004 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
TTC39A-216ENST00000530004 LOC102724159A0A0B4J2E5 919 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 NR3C2P08235 984 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 XRCC5P13010 732 aaKnown RBP16.22■□□□□ 0.19
TTC39A-216ENST00000530004 EDNRBP24530 442 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 CTCFP49711 727 aaPredicted RBP16.22■□□□□ 0.19
TTC39A-216ENST00000530004 PWP2Q15269 919 aaKnown RBP16.22■□□□□ 0.19
TTC39A-216ENST00000530004 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 IL31RAQ8NI17 732 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 IWS1Q96ST2 819 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 USP25Q9UHP3 1055 aa16.22■□□□□ 0.19
TTC39A-216ENST00000530004 A0A087WWV3 80 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 ASB14A6NK59 587 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 MARCH6O60337 910 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 FXR2P51116 673 aaKnown RBP eCLIP16.21■□□□□ 0.19
TTC39A-216ENST00000530004 LBX1P52954 281 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 MDM2Q00987 491 aaPredicted RBP16.21■□□□□ 0.19
TTC39A-216ENST00000530004 KARSQ15046 597 aaKnown RBP16.21■□□□□ 0.19
TTC39A-216ENST00000530004 POSTNQ15063 836 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 ZRSR1Q15695 479 aaKnown RBP16.21■□□□□ 0.19
TTC39A-216ENST00000530004 TMEM266Q2M3C6 531 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 PCNX4Q63HM2 1172 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
TTC39A-216ENST00000530004 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms