RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RANBP6O60518 1105 aaKnown RBP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF286BP0CG31 522 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 FDX1P10109 184 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CKBP12277 381 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ALADP13716 330 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ZP2Q05996 745 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 MBTPS1Q14703 1052 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 USH1GQ495M9 461 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 TCEAL5Q5H9L2 206 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 SYDE2Q5VT97 1194 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RCSD1Q6JBY9 416 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 GIMAP6Q6P9H5 292 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RNF207Q6ZRF8 634 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 SEPT14Q6ZU15 432 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CCDC155Q8N6L0 562 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 KBTBD3Q8NAB2 608 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CLEC4DQ8WXI8 215 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 KAT2BQ92831 832 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ALG1Q9BT22 464 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 LRRCC1Q9C099 1032 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 NAPBQ9H115 298 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RANBP17Q9H2T7 1088 aaKnown RBP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CPVLQ9H3G5 476 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 IL17RBQ9NRM6 502 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 LMCD1Q9NZU5 365 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 MUTYHQ9UIF7 546 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF318Q5VUA4 2279 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 PATL2C9JE40 543 aaKnown RBP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 UPP2O95045 317 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 MMP3P08254 477 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RPS6P62753 249 aaKnown RBP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 HNRNPUQ00839 825 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 TPRNQ4KMQ1 711 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RRP12Q5JTH9 1297 aaKnown RBP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF618Q5T7W0 954 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CAGE1Q8TC20 777 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 NEK9Q8TD19 979 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 SCFD2Q8WU76 684 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 NACAP1Q9BZK3 213 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 TOMM22Q9NS69 142 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 ECHDC1Q9NTX5 307 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 FAM86C1Q9NVL1 165 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CLDND1Q9NY35 253 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 HDAC6Q9UBN7 1215 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 SYNPO2Q9UMS6 1093 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 GTF3C3Q9Y5Q9 886 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 CACNA1HO95180 2353 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 ZFHX4Q86UP3 3567 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 CXCL10P02778 98 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 SLC3A2P08195 630 aaKnown RBP4.15□□□□□ -1.74
PTPRC-213ENST00000529828 CTSHP09668 335 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 GNAT2P19087 354 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 EDNRBP24530 442 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 IRS1P35568 1242 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 PTPN11Q06124 597 aaPredicted RBP4.15□□□□□ -1.74
PTPRC-213ENST00000529828 ARHGAP1Q07960 439 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 GPM6BQ13491 265 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 IKBKEQ14164 716 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 HIC1Q14526 733 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 LRRFIP1Q32MZ4 808 aaKnown RBP4.15□□□□□ -1.74
PTPRC-213ENST00000529828 EPC2Q52LR7 807 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 VPS53Q5VIR6 699 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 RPAINQ86UA6 219 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 C7orf31Q8N865 590 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 BANK1Q8NDB2 785 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 PRSS33Q8NF86 280 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 DCAF4Q8WV16 495 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 TBC1D5Q92609 795 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 MRPL38Q96DV4 380 aaKnown RBP4.15□□□□□ -1.74
PTPRC-213ENST00000529828 YME1L1Q96TA2 773 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 OSBPL7Q9BZF2 842 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 ZBTB40Q9NUA8 1239 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 GTF2IRD1Q9UHL9 959 aa4.15□□□□□ -1.74
PTPRC-213ENST00000529828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.15□□□□□ -1.74
PTPRC-213ENST00000529828 TRIP12Q14669 1992 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 ABHD14A-ACY1A0A1B0GW23 586 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 BHMG1C9JSJ3 638 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 NKRFO15226 690 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 FOXP2O15409 715 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 KPNA6O60684 536 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 PLA2G6O60733 806 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 LGR5O75473 907 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 GH1P01241 217 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 GOLGA8HP0CJ92 632 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 GTF2F1P35269 517 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 THPOP40225 353 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 DLX2Q07687 328 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 MFSD10Q14728 455 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 PTPROQ16827 1216 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 KIAA0753Q2KHM9 967 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 TRIM71Q2Q1W2 868 aaKnown RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 TIGD5Q53EQ6 642 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 CCDC62Q6P9F0 684 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 DHX37Q8IY37 1157 aaKnown RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 DBF4BQ8NFT6 615 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 OTUD7AQ8TE49 926 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 PABPC5Q96DU9 382 aaKnown RBP4.15□□□□□ -1.75
PTPRC-213ENST00000529828 TMEM47Q9BQJ4 181 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 FSD1Q9BTV5 496 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms