RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 PCDH10Q9P2E7 1040 aa18.47■□□□□ 0.55
TSPAN4-218ENST00000529566 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-218ENST00000529566 UBIAD1Q9Y5Z9 338 aa18.47■□□□□ 0.55
TSPAN4-218ENST00000529566 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 ARVCFO00192 962 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 MMP3P08254 477 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 SYN1P17600 705 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 SREBF1P36956 1147 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 AP3B2Q13367 1082 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 NPY5RQ15761 445 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 GNPTABQ3T906 1256 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 JAKMIP3Q5VZ66 844 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 PPTC7Q8NI37 304 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 TOX2Q96NM4 488 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 POLR3EQ9NVU0 708 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 STK36Q9NRP7 1315 aa18.46■□□□□ 0.55
TSPAN4-218ENST00000529566 FIBPO43427 364 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 KPNA6O60684 536 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 CDKL5O76039 1030 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 GGPS1O95749 300 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 MYL3P08590 195 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 GNA11P29992 359 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 PSMC6P62333 389 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 SH3RF1Q7Z6J0 888 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 DHX37Q8IY37 1157 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 CCDC148Q8NFR7 591 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 CYP2W1Q8TAV3 490 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 VTI1AQ96AJ9 217 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 GPRASP2Q96D09 838 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 PRO3102Q9H379 93 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 PDLIM7Q9NR12 457 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 LIMCH1Q9UPQ0 1083 aa18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-218ENST00000529566 TRIM43BA6NCK2 446 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 ITGA7Q13683 1181 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 HSDL1Q3SXM5 330 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 NLRX1Q86UT6 975 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 FAM177A1Q8N128 213 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 REXO1Q8N1G1 1221 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 KAT2BQ92831 832 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 TRIM43Q96BQ3 446 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 TBC1D32Q96NH3 1257 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 SENP7Q9BQF6 1050 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 MTG1Q9BT17 334 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 EHMT1Q9H9B1 1298 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 JADE2Q9NQC1 790 aa18.44■□□□□ 0.54
TSPAN4-218ENST00000529566 SCN10AQ9Y5Y9 1956 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 M0R2N6 131 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 EDIL3O43854 480 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 SORBS3O60504 671 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 PQBP1O60828 265 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 ATP9AO75110 1047 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 CD4P01730 458 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 CYP3A4P08684 503 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 KCNA2P16389 499 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 FAM126BQ8IXS8 530 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 NSUN7Q8NE18 718 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 BICD2Q8TD16 824 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 RASGRP4Q8TDF6 673 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 SPATA33Q96N06 139 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 MXRA8Q9BRK3 442 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 BACH2Q9BYV9 841 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 TELO2Q9Y4R8 837 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 MYH7BA7E2Y1 1941 aa18.43■□□□□ 0.54
TSPAN4-218ENST00000529566 MEIS1O00470 390 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 KIAA0355O15063 1070 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 MAFGO15525 162 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 PPFIA4O75335 1185 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 NLRP5P59047 1200 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 ARHGAP4P98171 946 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 NEDD9Q14511 834 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 RABEP1Q15276 862 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 DGKDQ16760 1214 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 CEP55Q53EZ4 464 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 METTL7BQ6UX53 244 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 CYFIP1Q7L576 1253 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 DAGLBQ8NCG7 672 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 GDF15Q99988 308 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 SEZ6LQ9BYH1 1024 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 ORC3Q9UBD5 711 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 PCDHA4Q9UN74 947 aa18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 COLQQ9Y215 455 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-218ENST00000529566 DCDC2CA8MYV0 355 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 CLTBP09497 229 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 ITGB8P26012 769 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 MAGEA10P43363 369 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 MTMR1Q13613 665 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 NBPF20Q3BBV1 942 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 CDHR1Q96JP9 859 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 PHF20Q9BVI0 1012 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 UPF2Q9HAU5 1272 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-218ENST00000529566 KCNH7Q9NS40 1196 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms