RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 CPP00450 1065 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 PABPC1P11940 636 aaKnown RBP6.99□□□□□ -1.29
CSDE1-212ENST00000529046 TACR1P25103 407 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 MAPKAPK2P49137 400 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 CDR1P51861 262 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 SCRN1Q12765 414 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 PLEKHN1Q494U1 663 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-212ENST00000529046 YOD1Q5VVQ6 348 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-212ENST00000529046 SCUBE1Q8IWY4 988 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 NLGN1Q8N2Q7 840 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 SH3TC2Q8TF17 1288 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 MZB1Q8WU39 189 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 EXOC2Q96KP1 924 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 ZMYM4Q5VZL5 1548 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 FRMPD1Q5SYB0 1578 aa6.99□□□□□ -1.29
CSDE1-212ENST00000529046 CCDC163A0A0D9SF12 145 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 ENPP3O14638 875 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 CYBBP04839 570 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 THBDP07204 575 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 DBHP09172 617 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 PI3P19957 117 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 E4F1Q66K89 784 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-212ENST00000529046 ZC3H14Q6PJT7 736 aaKnown RBP6.98□□□□□ -1.29
CSDE1-212ENST00000529046 PAQR3Q6TCH7 311 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 TMEM145Q8NBT3 493 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 ZSWIM2Q8NEG5 633 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 NLGN2Q8NFZ4 835 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 MMP19Q99542 508 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 PTCH2Q9Y6C5 1203 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 POGZQ7Z3K3 1410 aa6.98□□□□□ -1.29
CSDE1-212ENST00000529046 TRBV23OR9-2A0A075B6M9 112 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 C6orf222P0C671 652 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-212ENST00000529046 PAMP19021 973 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 NTRK3Q16288 839 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 EFCAB2Q5VUJ9 269 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 LDHDQ86WU2 507 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 IER2Q9BTL4 223 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 DHRS4Q9BTZ2 278 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 ARHGAP35Q9NRY4 1499 aa6.97□□□□□ -1.29
CSDE1-212ENST00000529046 ARHGEF40Q8TER5 1519 aa6.96□□□□□ -1.29
CSDE1-212ENST00000529046 BCORL1Q5H9F3 1711 aa6.96□□□□□ -1.29
CSDE1-212ENST00000529046 RICTORQ6R327 1708 aa6.96□□□□□ -1.29
CSDE1-212ENST00000529046 NPHP3-ACAD11A0A0J9YXS1 232 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 IRS4O14654 1257 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-212ENST00000529046 KCNQ2O43526 872 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 TCERG1LQ5VWI1 586 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 NSMFQ6X4W1 530 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 CCDC103Q8IW40 242 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 TMEM151BQ8IW70 566 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 KCTD13Q8WZ19 329 aa6.96□□□□□ -1.3
CSDE1-212ENST00000529046 MRPL42Q9Y6G3 142 aaKnown RBP6.96□□□□□ -1.3
CSDE1-212ENST00000529046 SCAPERQ9BY12 1400 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 HECW1Q76N89 1606 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 TRBV23-1A0A0A0MS06 115 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 PRODHO43272 600 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 SNRPB2P08579 225 aaKnown RBP6.95□□□□□ -1.3
CSDE1-212ENST00000529046 PLS3P13797 630 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 ZNF200P98182 395 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-212ENST00000529046 TRIM61Q5EBN2 209 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 FAM209AQ5JX71 171 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 CABP7Q86V35 215 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 IGDCC3Q8IVU1 814 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 PANK1Q8TE04 598 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 DBR1Q9UK59 544 aaKnown RBP6.95□□□□□ -1.3
CSDE1-212ENST00000529046 MRPS23Q9Y3D9 190 aaKnown RBP6.95□□□□□ -1.3
CSDE1-212ENST00000529046 RWDD3Q9Y3V2 267 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 PCDHA5Q9Y5H7 936 aa6.95□□□□□ -1.3
CSDE1-212ENST00000529046 ARID4BQ4LE39 1312 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-212ENST00000529046 TROQ12816 1431 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 BUB1BO60566 1050 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 NCKAP1LP55160 1127 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 PRSS53Q2L4Q9 553 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 MBLAC2Q68D91 279 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 IQCEQ6IPM2 695 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 RSPO2Q6UXX9 243 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 TMEFF1Q8IYR6 380 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 Q8N1Y9 231 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 SYNPOQ8N3V7 929 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 LZTR1Q8N653 840 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 CLEC1BQ9P126 229 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 GULP1Q9UBP9 304 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 TMEFF2Q9UIK5 374 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 TMA7Q9Y2S6 64 aaKnown RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 HCFC2Q9Y5Z7 792 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 CDK13Q14004 1512 aaKnown RBP6.94□□□□□ -1.3
CSDE1-212ENST00000529046 TTC37Q6PGP7 1564 aa6.94□□□□□ -1.3
CSDE1-212ENST00000529046 CLIP1P30622 1438 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 ATP10AO60312 1499 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 ZNF518AQ6AHZ1 1483 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 ZFYVE16Q7Z3T8 1539 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 ZC3H12DA2A288 527 aaKnown RBP6.93□□□□□ -1.3
CSDE1-212ENST00000529046 NPHS1O60500 1241 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 GLI4P10075 376 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms