RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 DESI2Q9BSY9 194 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 TSGA10Q9BZW7 698 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 FAM53CQ9NYF3 392 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 ZNF70Q9UC06 446 aaPredicted RBP11.89□□□□□ -0.51
PUF60-213ENST00000528999 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 DNM3Q9UQ16 869 aa11.89□□□□□ -0.51
PUF60-213ENST00000528999 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 YDJCA8MPS7 323 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
PUF60-213ENST00000528999 COBLO75128 1261 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 IDEP14735 1019 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 ARHGAP25P42331 645 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 CACNB3P54284 484 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 COASYQ13057 564 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 ELF2Q15723 593 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 EDRF1Q3B7T1 1238 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 ZNF569Q5MCW4 686 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 FAM26FQ5R3K3 315 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 USP17L6PQ6QN14 398 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 RSRC2Q7L4I2 434 aaKnown RBP11.88□□□□□ -0.51
PUF60-213ENST00000528999 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
PUF60-213ENST00000528999 GOLGA1Q92805 767 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 NAPGQ99747 312 aaPredicted RBP11.88□□□□□ -0.51
PUF60-213ENST00000528999 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 PLAGL2Q9UPG8 496 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 MRPL11Q9Y3B7 192 aaKnown RBP11.88□□□□□ -0.51
PUF60-213ENST00000528999 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
PUF60-213ENST00000528999 MYH4Q9Y623 1939 aa11.88□□□□□ -0.51
PUF60-213ENST00000528999 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
PUF60-213ENST00000528999 RASSF10A6NK89 507 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 PSMD14O00487 310 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 PES1O00541 588 aaKnown RBP11.87□□□□□ -0.51
PUF60-213ENST00000528999 KRT86O43790 486 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 C21orf2O43822 256 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 LCA5LO95447 670 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 CYP11B2P19099 503 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 STAT2P52630 851 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 SLC12A3P55017 1021 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 SPIRE1Q08AE8 756 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 NAA30Q147X3 362 aaPredicted RBP11.87□□□□□ -0.51
PUF60-213ENST00000528999 KIF4BQ2VIQ3 1234 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 KCNK18Q7Z418 384 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 SMAP1Q8IYB5 467 aaPredicted RBP11.87□□□□□ -0.51
PUF60-213ENST00000528999 TUFT1Q9NNX1 390 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 LZTFL1Q9NQ48 299 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 MAP3K20Q9NYL2 800 aaKnown RBP11.87□□□□□ -0.51
PUF60-213ENST00000528999 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 ZNRF3Q9ULT6 936 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 SIK3Q9Y2K2 1263 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 PCDHA2Q9Y5H9 948 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 PCDHAC2Q9Y5I4 1007 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 COL4A3BPQ9Y5P4 624 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 SIPA1L1O43166 1804 aa11.87□□□□□ -0.51
PUF60-213ENST00000528999 GCOM1H8Y6P7 765 aaPredicted RBP11.86□□□□□ -0.51
PUF60-213ENST00000528999 FANCGO15287 622 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 POLR2MP0CAP2 368 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 GAP43P17677 238 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 IKQ13123 557 aaPredicted RBP11.86□□□□□ -0.51
PUF60-213ENST00000528999 SPA17Q15506 151 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 ECM1Q16610 540 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 HERC4Q5GLZ8 1057 aaPredicted RBP11.86□□□□□ -0.51
PUF60-213ENST00000528999 FBXO38Q6PIJ6 1188 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 GPBP1Q86WP2 473 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 LENG9Q96B70 501 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
PUF60-213ENST00000528999 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
PUF60-213ENST00000528999 CHP1Q99653 195 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 SLF1Q9BQI6 1058 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 RANBP17Q9H2T7 1088 aaKnown RBP11.86□□□□□ -0.51
PUF60-213ENST00000528999 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
PUF60-213ENST00000528999 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
PUF60-213ENST00000528999 A0A1W2PRG0 241 aa11.85□□□□□ -0.51
PUF60-213ENST00000528999 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
PUF60-213ENST00000528999 FAM196BA6NMK8 535 aa11.85□□□□□ -0.51
PUF60-213ENST00000528999 CETN3O15182 167 aa11.85□□□□□ -0.51
PUF60-213ENST00000528999 RAD21O60216 631 aa11.85□□□□□ -0.51
PUF60-213ENST00000528999 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms