RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBXN1-209ENST00000528907 PDGFCQ9NRA1 345 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
UBXN1-209ENST00000528907 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
UBXN1-209ENST00000528907 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
UBXN1-209ENST00000528907 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 DUSP11O75319 330 aaKnown RBP16.36■□□□□ 0.21
UBXN1-209ENST00000528907 ZNF76P36508 570 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 ADCYAP1R1P41586 468 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 RESTQ13127 1097 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 MTMR1Q13613 665 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 RILPL1Q5EBL4 403 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 EMID1Q96A84 441 aaPredicted RBP16.36■□□□□ 0.21
UBXN1-209ENST00000528907 WDR11Q9BZH6 1224 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 RTEL1Q9NZ71 1219 aa16.36■□□□□ 0.21
UBXN1-209ENST00000528907 DDX20Q9UHI6 824 aaKnown RBP16.36■□□□□ 0.21
UBXN1-209ENST00000528907 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
UBXN1-209ENST00000528907 TBX3O15119 743 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 ARIH2O95376 493 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 CCL5P13501 91 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 SMPD1P17405 629 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 TNFAIP2Q03169 654 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 MTFR1Q15390 333 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 LETM2Q2VYF4 491 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 LHX8Q68G74 356 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 MCTP1Q6DN14 999 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 SEPT14Q6ZU15 432 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
UBXN1-209ENST00000528907 CYP2W1Q8TAV3 490 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 UNC93B1Q9H1C4 597 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 KCNH7Q9NS40 1196 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 NFASCO94856 1347 aa16.35■□□□□ 0.21
UBXN1-209ENST00000528907 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.34■□□□□ 0.21
UBXN1-209ENST00000528907 ADCY6O43306 1168 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 TDP2O95551 362 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 BRD1O95696 1058 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 GJB1P08034 283 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
UBXN1-209ENST00000528907 TXNP10599 105 aaKnown RBP16.34■□□□□ 0.21
UBXN1-209ENST00000528907 KCNA2P16389 499 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
UBXN1-209ENST00000528907 NEDD9Q14511 834 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
UBXN1-209ENST00000528907 UPF3AQ9H1J1 476 aaKnown RBP16.34■□□□□ 0.21
UBXN1-209ENST00000528907 AGO4Q9HCK5 861 aaKnown RBP16.34■□□□□ 0.21
UBXN1-209ENST00000528907 ARP10275 920 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 RARBP10826 455 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 UBA1P22314 1058 aaKnown RBP16.33■□□□□ 0.2
UBXN1-209ENST00000528907 CNGA1P29973 690 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 GJA9P57773 515 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 SP2Q02086 613 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 PRR16Q569H4 304 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 ZFP91Q96JP5 570 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-209ENST00000528907 RNF208Q9H0X6 261 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 KCNMB3Q9NPA1 279 aa16.33■□□□□ 0.2
UBXN1-209ENST00000528907 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.33■□□□□ 0.2
UBXN1-209ENST00000528907 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-209ENST00000528907 DDX25Q9UHL0 483 aaKnown RBP16.33■□□□□ 0.2
UBXN1-209ENST00000528907 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-209ENST00000528907 CCNT1O60563 726 aaKnown RBP16.32■□□□□ 0.2
UBXN1-209ENST00000528907 ATP9AO75110 1047 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 ADAMTS4O75173 837 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 F13A1P00488 732 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 GH1P01241 217 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 CST5P28325 142 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-209ENST00000528907 GJA8P48165 433 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 NUCB2P80303 420 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 CELF3Q5SZQ8 465 aaKnown RBP16.32■□□□□ 0.2
UBXN1-209ENST00000528907 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 FAM20AQ96MK3 541 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 IPO9Q96P70 1041 aaKnown RBP16.32■□□□□ 0.2
UBXN1-209ENST00000528907 RIT2Q99578 217 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 TBC1D22BQ9NU19 505 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
UBXN1-209ENST00000528907 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-209ENST00000528907 IPO5O00410 1097 aaKnown RBP16.31■□□□□ 0.2
UBXN1-209ENST00000528907 LAD1O00515 517 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 WNT7AO00755 349 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 MSH4O15457 936 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
UBXN1-209ENST00000528907 SLC37A4O43826 429 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 FARP2O94887 1054 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-209ENST00000528907 SGPL1O95470 568 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 ARHGAP1Q07960 439 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 PKP1Q13835 747 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 LY6KQ17RY6 165 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 TMEM63BQ5T3F8 832 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 METTL7BQ6UX53 244 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 TLK2Q86UE8 772 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 KLHDC9Q8NEP7 349 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 MTMR9Q96QG7 549 aa16.31■□□□□ 0.2
UBXN1-209ENST00000528907 ZNF577Q9BSK1 485 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms