RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 SOX1O00570 391 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-210ENST00000528441 KIAA0355O15063 1070 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 B4GALT4O60513 344 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 CYP2C18P33260 490 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 HSPA4P34932 840 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 PURAQ00577 322 aaKnown RBP10.43□□□□□ -0.74
CMTM1-210ENST00000528441 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 SHHQ15465 462 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 UBE2SQ16763 222 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 ZNF697Q5TEC3 545 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 ERICH6BQ5W0A0 696 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 USP17L6PQ6QN14 398 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 SGMS1Q86VZ5 419 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 CCDC155Q8N6L0 562 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 TRPV6Q9H1D0 765 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 TRMT13Q9NUP7 481 aaKnown RBP10.43□□□□□ -0.74
CMTM1-210ENST00000528441 PKD2L1Q9P0L9 805 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 SNX14Q9Y5W7 946 aa10.43□□□□□ -0.74
CMTM1-210ENST00000528441 CPLX1O14810 134 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 CTAGE5O15320 804 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 ZNF286BP0CG31 522 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 ACRP10323 421 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 CYP2C9P11712 490 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 CSF2RAP15509 400 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 ZNF76P36508 570 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 ADCY7P51828 1080 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 LRIT3Q3SXY7 679 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 C9orf50Q5SZB4 431 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 PSRC1Q6PGN9 363 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-210ENST00000528441 DEFB123Q8N688 67 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 IL31RAQ8NI17 732 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-210ENST00000528441 PRO3102Q9H379 93 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 TCEAL9Q9UHQ7 104 aa10.42□□□□□ -0.74
CMTM1-210ENST00000528441 DDX41Q9UJV9 622 aaKnown RBP10.42□□□□□ -0.74
CMTM1-210ENST00000528441 CNTNAP5Q8WYK1 1306 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 OPLAHO14841 1288 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 FIBPO43427 364 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 STAM2O75886 525 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 UBA1P22314 1058 aaKnown RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 ITGB8P26012 769 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 PSEN2P49810 448 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 CDK7P50613 346 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 CCT2P78371 535 aaKnown RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 ARHGAP1Q07960 439 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 NEDD9Q14511 834 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 PTGISQ16647 500 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 UTP14CQ5TAP6 766 aaKnown RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 Q7L0L9 218 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 DEFB128Q7Z7B8 93 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 RPUSD2Q8IZ73 545 aaKnown RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 CCDC12Q8WUD4 166 aaPredicted RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 FTOQ9C0B1 505 aaKnown RBP eCLIP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
CMTM1-210ENST00000528441 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
CMTM1-210ENST00000528441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-210ENST00000528441 SMCO2A6NFE2 343 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 A6NJR5 290 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 EIF5BO60841 1220 aaKnown RBP10.4□□□□□ -0.74
CMTM1-210ENST00000528441 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 ACTN1P12814 892 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 NKX3-2P78367 333 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
CMTM1-210ENST00000528441 STK3Q13188 491 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 BFSP2Q13515 415 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 COL9A3Q14050 684 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-210ENST00000528441 MFSD10Q14728 455 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 KIAA0753Q2KHM9 967 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 CELF3Q5SZQ8 465 aaKnown RBP10.4□□□□□ -0.74
CMTM1-210ENST00000528441 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 NFRKBQ6P4R8 1299 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 CCDC62Q6P9F0 684 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 CYFIP1Q7L576 1253 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 VSIG10LQ86VR7 867 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 TRIM22Q8IYM9 498 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 SCLYQ96I15 445 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 CDHR1Q96JP9 859 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 ZNF215Q9UL58 517 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-210ENST00000528441 PCDHA6Q9UN73 950 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 PCDHA8Q9Y5H6 950 aa10.4□□□□□ -0.74
CMTM1-210ENST00000528441 UMODL1Q5DID0 1318 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 hCG_1984214I3L0E3 225 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 CD4P01730 458 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 FGBP02675 491 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 TGFB3P10600 412 aa10.39□□□□□ -0.75
CMTM1-210ENST00000528441 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms