RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 HSDL1Q3SXM5 330 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 SPRED2Q7Z698 418 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 HERC6Q8IVU3 1022 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 MB21D2Q8IYB1 491 aaPredicted RBP18■□□□□ 0.47
CLNS1A-210ENST00000528364 MICALL1Q8N3F8 863 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 CAGE1Q8TC20 777 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 SPATA33Q96N06 139 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 MYL10Q9BUA6 226 aa18■□□□□ 0.47
CLNS1A-210ENST00000528364 RBM8AQ9Y5S9 174 aaKnown RBP18■□□□□ 0.47
CLNS1A-210ENST00000528364 NBNO60934 754 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 PPFIA4O75335 1185 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 CKBP12277 381 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 KRT40Q6A162 431 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 LRRC8DQ7L1W4 858 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 PHOSPHO2Q8TCD6 241 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 SLC9A7Q96T83 725 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 RTEL1Q9NZ71 1219 aa17.99■□□□□ 0.47
CLNS1A-210ENST00000528364 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 F2P00734 622 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 HOXD8P13378 290 aaPredicted RBP17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 UBA1P22314 1058 aaKnown RBP17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 CCND2P30279 289 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 MRPS9P82933 396 aaKnown RBP17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 TAP1Q03518 808 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 TRIM71Q2Q1W2 868 aaKnown RBP17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 TRAF7Q6Q0C0 670 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 CATIPQ7Z7H3 387 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 SAMD3Q8N6K7 520 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 CCDC155Q8N6L0 562 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 SYMPKQ92797 1274 aaKnown RBP17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 C16orf70Q9BSU1 422 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 TELO2Q9Y4R8 837 aa17.98■□□□□ 0.47
CLNS1A-210ENST00000528364 VCANP13611 3396 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 DEFB103AP81534 67 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 ZNF618Q5T7W0 954 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 KATNAL1Q9BW62 490 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 MLXIPQ9HAP2 919 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 LY9Q9HBG7 655 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 THEGQ9P2T0 379 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 TANC1Q9C0D5 1861 aa17.97■□□□□ 0.47
CLNS1A-210ENST00000528364 LCHNA4D1U4 455 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 WDR5P61964 334 aaKnown RBP17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 RBL2Q08999 1139 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 SEMA3FQ13275 785 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 PTK7Q13308 1070 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 MBTPS1Q14703 1052 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 USP17L6PQ6QN14 398 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 ZNF654Q8IZM8 581 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 CMTR1Q8N1G2 835 aaKnown RBP17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 ATXN2LQ8WWM7 1075 aaKnown RBP17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 ARNTL2Q8WYA1 636 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 ASB2Q96Q27 587 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 MTCH2Q9Y6C9 303 aa17.96■□□□□ 0.47
CLNS1A-210ENST00000528364 KIF28PB7ZC32 967 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 PRC1O43663 620 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 BAIAP3O94812 1187 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 PLEKHA8P1O95397 391 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 CXCL10P02778 98 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 TGFB3P10600 412 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 RXRAP19793 462 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 KCNJ6P48051 423 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 TRAF1Q13077 416 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 NCOR1O75376 2440 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 PTPRSQ13332 1948 aa17.95■□□□□ 0.46
CLNS1A-210ENST00000528364 SPATA31C2B4DYI2 1134 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 TLL1O43897 1013 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 MRPS5P82675 430 aaKnown RBP17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 TFF2Q03403 129 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 FAM117BQ6P1L5 589 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 CNKSR3Q6P9H4 555 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 CYFIP1Q7L576 1253 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 SRBD1Q8N5C6 995 aaKnown RBP17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 OSBPL7Q9BZF2 842 aa17.94■□□□□ 0.46
CLNS1A-210ENST00000528364 TCF20Q9UGU0 1960 aaKnown RBP17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 hCG_1642624A0A1W2PR95 340 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 H3BRB1 525 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 MEIS2O14770 477 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 SLC27A2O14975 620 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 LGALS2P05162 132 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 ICAM3P32942 547 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 CTCFLQ8NI51 663 aaPredicted RBP17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 RRP36Q96EU6 259 aaKnown RBP17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 INPP4AQ96PE3 977 aaPredicted RBP17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 ZBED2Q9BTP6 218 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 SPZ1Q9BXG8 430 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 RNPEPQ9H4A4 650 aa17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 TUT1Q9H6E5 874 aaKnown RBP17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 SPTBN5Q9NRC6 3674 aaKnown RBP17.93■□□□□ 0.46
CLNS1A-210ENST00000528364 DOCK5Q9H7D0 1870 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms