RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.85■□□□□ 0.453e-6■■■□□ 18.7
CAPN1-213ENST00000527897 NOC4LQ9BVI4 516 aaKnown RBP17.85■□□□□ 0.45
CAPN1-213ENST00000527897 TGFB3P10600 412 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 SP4Q02446 784 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 HSDL1Q3SXM5 330 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 MYSM1Q5VVJ2 828 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 PCNX4Q63HM2 1172 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 EMID1Q96A84 441 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-213ENST00000527897 SCLYQ96I15 445 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 FAM161BQ96MY7 647 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 BCAS3Q9H6U6 928 aa17.84■□□□□ 0.45
CAPN1-213ENST00000527897 FAM217BQ9NTX9 383 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-213ENST00000527897 CCDC196A0A1B0GTZ2 297 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 NOP56O00567 594 aaKnown RBP17.83■□□□□ 0.44
CAPN1-213ENST00000527897 FIBPO43427 364 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 PPFIA3O75145 1194 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 STAM2O75886 525 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 PSEN2P49810 448 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 FUT2Q10981 343 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 KAT2BQ92831 832 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 INPP4AQ96PE3 977 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-213ENST00000527897 KATNAL1Q9BW62 490 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 USP26Q9BXU7 913 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 PCDHA6Q9UN73 950 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 PCDHA8Q9Y5H6 950 aa17.83■□□□□ 0.44
CAPN1-213ENST00000527897 STXBP3O00186 592 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 ADCY7P51828 1080 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 PTPN11Q06124 597 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-213ENST00000527897 SEMA3FQ13275 785 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 MFSD10Q14728 455 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 PTGISQ16647 500 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 KIAA0753Q2KHM9 967 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 TMEM240Q5SV17 173 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 TYW1BQ6NUM6 668 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 GPR153Q6NV75 609 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 RUFY3Q7L099 469 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 C16orf59Q7L2K0 433 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 NLRX1Q86UT6 975 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 UPF3BQ9BZI7 483 aaKnown RBP17.82■□□□□ 0.44
CAPN1-213ENST00000527897 WNT8AQ9H1J5 351 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 IL23AQ9NPF7 189 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 PKD2L1Q9P0L9 805 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
CAPN1-213ENST00000527897 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 SPATA31C2B4DYI2 1134 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 RCAN1P53805 252 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
CAPN1-213ENST00000527897 NEDD9Q14511 834 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 GDF6Q6KF10 455 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-213ENST00000527897 XRRA1Q6P2D8 792 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 PSRC1Q6PGN9 363 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-213ENST00000527897 DEFB128Q7Z7B8 93 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 RETREG2Q8NC44 543 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
CAPN1-213ENST00000527897 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
CAPN1-213ENST00000527897 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 F2P00734 622 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 FGBP02675 491 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 ICAM3P32942 547 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 AKAP17AQ02040 695 aaKnown RBP17.8■□□□□ 0.44
CAPN1-213ENST00000527897 ZNF697Q5TEC3 545 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 PPP1R18Q6NYC8 613 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 OTOP2Q7RTS6 562 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 PHKBQ93100 1093 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 NCOA5Q9HCD5 579 aaKnown RBP17.8■□□□□ 0.44
CAPN1-213ENST00000527897 RIC8AQ9NPQ8 531 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 SCN5AQ14524 2016 aa17.8■□□□□ 0.44
CAPN1-213ENST00000527897 TRIP12Q14669 1992 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-213ENST00000527897 hCG_1984214I3L0E3 225 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 EPB41L2O43491 1005 aaKnown RBP17.79■□□□□ 0.44
CAPN1-213ENST00000527897 SCG2P13521 617 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 SMAD3P84022 425 aaKnown RBP17.79■□□□□ 0.44
CAPN1-213ENST00000527897 BFSP2Q13515 415 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 PFKFB3Q16875 520 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-213ENST00000527897 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
CAPN1-213ENST00000527897 METTL7BQ6UX53 244 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
CAPN1-213ENST00000527897 ZNF713Q8N859 430 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-213ENST00000527897 SLC26A6Q9BXS9 759 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 ZSWIM6Q9HCJ5 1215 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 TMEM260Q9NX78 707 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 GTF2IRD1Q9UHL9 959 aa17.79■□□□□ 0.44
CAPN1-213ENST00000527897 ZBBXA8MT70 800 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 LGALS2P05162 132 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 ITGB5P18084 799 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
CAPN1-213ENST00000527897 ZNF200P98182 395 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-213ENST00000527897 STK3Q13188 491 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 MTMR1Q13613 665 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-213ENST00000527897 FAM109BQ6ICB4 259 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-213ENST00000527897 SESTD1Q86VW0 696 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
CAPN1-213ENST00000527897 GPRASP2Q96D09 838 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms