RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PCDHA6Q9UN73 950 aa30.25■■■□□ 2.43
TSPAN4-217ENST00000527644 PCDHA8Q9Y5H6 950 aa30.25■■■□□ 2.43
TSPAN4-217ENST00000527644 SPATA31C2B4DYI2 1134 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 PRPF3O43395 683 aaKnown RBP30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 FIBPO43427 364 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 SUPT20HL2P0C7V6 817 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 ADCY7P51828 1080 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 ANAPC15P60006 121 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 FPGSQ05932 587 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 PTPN11Q06124 597 aaPredicted RBP30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 MFSD5Q6N075 450 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 NLRX1Q86UT6 975 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 EHMT1Q9H9B1 1298 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 MLXIPQ9HAP2 919 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 PDRG1Q9NUG6 133 aa30.24■■■□□ 2.43
TSPAN4-217ENST00000527644 LAMA3Q16787 3333 aa30.23■■■□□ 2.43
TSPAN4-217ENST00000527644 SMCO2A6NFE2 343 aa30.23■■■□□ 2.43
TSPAN4-217ENST00000527644 SCG2P13521 617 aa30.23■■■□□ 2.43
TSPAN4-217ENST00000527644 ZNF274Q96GC6 653 aaPredicted RBP30.23■■■□□ 2.43
TSPAN4-217ENST00000527644 SPATA33Q96N06 139 aa30.23■■■□□ 2.43
TSPAN4-217ENST00000527644 MYH7BA7E2Y1 1941 aa30.23■■■□□ 2.43
TSPAN4-217ENST00000527644 PPFIA4O75335 1185 aa30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 FOSP01100 380 aaPredicted RBP30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 HOXD8P13378 290 aaPredicted RBP30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 NEDD9Q14511 834 aa30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 NTRK3Q16288 839 aa30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 FAM47CQ5HY64 1035 aa30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 KAT2BQ92831 832 aa30.22■■■□□ 2.43
TSPAN4-217ENST00000527644 SOX1O00570 391 aaPredicted RBP30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 IFNAR1P17181 557 aa30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 CCT2P78371 535 aaKnown RBP30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 AKAP17AQ02040 695 aaKnown RBP30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 SEMA3FQ13275 785 aa30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 HSDL1Q3SXM5 330 aa30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 TMEM199Q8N511 208 aa30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 PPP1R12CQ9BZL4 782 aa30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 HIPK3Q9H422 1215 aa30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 TRMT13Q9NUP7 481 aaKnown RBP30.21■■■□□ 2.43
TSPAN4-217ENST00000527644 SORBS3O60504 671 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 SHHQ15465 462 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 PKN1Q16512 942 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 PHKBQ93100 1093 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 GPRASP2Q96D09 838 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 CDHR1Q96JP9 859 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 SENP7Q9BQF6 1050 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 KATNAL1Q9BW62 490 aa30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 RNF26Q9BY78 433 aaPredicted RBP30.2■■■□□ 2.43
TSPAN4-217ENST00000527644 CHMP4BP1P59074 171 aa30.19■■■□□ 2.42
TSPAN4-217ENST00000527644 PPIGQ13427 754 aaKnown RBP eCLIP30.19■■■□□ 2.423e-12■□□□□ 10.1
TSPAN4-217ENST00000527644 C9orf50Q5SZB4 431 aa30.19■■■□□ 2.42
TSPAN4-217ENST00000527644 METTL7BQ6UX53 244 aa30.19■■■□□ 2.42
TSPAN4-217ENST00000527644 CCDC12Q8WUD4 166 aaPredicted RBP30.19■■■□□ 2.42
TSPAN4-217ENST00000527644 NCOA5Q9HCD5 579 aaKnown RBP30.19■■■□□ 2.42
TSPAN4-217ENST00000527644 ESYT2A0FGR8 921 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 CYP2C18P33260 490 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 EPHB4P54760 987 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 AP3B2Q13367 1082 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 SESTD1Q86VW0 696 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 LRCH3Q96II8 777 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 NOC4LQ9BVI4 516 aaKnown RBP30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 UBIAD1Q9Y5Z9 338 aa30.18■■■□□ 2.42
TSPAN4-217ENST00000527644 F2P00734 622 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 ITGB5P18084 799 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 CLK2P49760 499 aaKnown RBP30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 PSEN2P49810 448 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 CYFIP1Q7L576 1253 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 GIMAP8Q8ND71 665 aaPredicted RBP30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 PPP1R13LQ8WUF5 828 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 IL17RAQ96F46 866 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 LARP6Q9BRS8 491 aaKnown RBP30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 SLC26A6Q9BXS9 759 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 ZMYND12Q9H0C1 365 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 BCAS3Q9H6U6 928 aa30.17■■■□□ 2.42
TSPAN4-217ENST00000527644 MAFGO15525 162 aa30.16■■■□□ 2.42
TSPAN4-217ENST00000527644 ZNF286BP0CG31 522 aa30.16■■■□□ 2.42
TSPAN4-217ENST00000527644 MFSD10Q14728 455 aa30.16■■■□□ 2.42
TSPAN4-217ENST00000527644 ANO3Q9BYT9 981 aa30.16■■■□□ 2.42
TSPAN4-217ENST00000527644 C6orf50Q9HD87 102 aa30.16■■■□□ 2.42
TSPAN4-217ENST00000527644 JADE2Q9NQC1 790 aa30.16■■■□□ 2.42
TSPAN4-217ENST00000527644 HAS3O00219 553 aa30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 NOP56O00567 594 aaKnown RBP30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 CSF2RAP15509 400 aa30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 MTMR1Q13613 665 aa30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 GPR153Q6NV75 609 aa30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 TRIM22Q8IYM9 498 aa30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 SZT2Q5T011 3432 aa30.15■■■□□ 2.42
TSPAN4-217ENST00000527644 CPLX1O14810 134 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 CYP2C9P11712 490 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 GNA11P29992 359 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 KIAA0753Q2KHM9 967 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 MCTP2Q6DN12 878 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 C7orf31Q8N865 590 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 PGBD1Q96JS3 809 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 ALG1Q9BT22 464 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 TMEM260Q9NX78 707 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 NOD1Q9Y239 953 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 UMODL1Q5DID0 1318 aa30.14■■■□□ 2.42
TSPAN4-217ENST00000527644 PPFIA3O75145 1194 aa30.13■■■□□ 2.41
TSPAN4-217ENST00000527644 SSRP1Q08945 709 aaKnown RBP30.13■■■□□ 2.41
TSPAN4-217ENST00000527644 CPLX2Q6PUV4 134 aaKnown RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms