RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PICALMQ13492 652 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 SNX17Q15036 470 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 PCBP1Q15365 356 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 SEPT7Q16181 437 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 NKG7Q16617 165 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 ZNF827Q17R98 1081 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 EFCAB2Q5VUJ9 269 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 YOD1Q5VVQ6 348 aaPredicted RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 CXorf57Q6NSI4 855 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 NLRC3Q7RTR2 1065 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 SPPL2CQ8IUH8 684 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 HID1Q8IV36 788 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 MCATQ8IVS2 390 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 TAB3Q8N5C8 712 aaPredicted RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 CNTD1Q8N815 330 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 FAM13CQ8NE31 585 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 PIWIL2Q8TC59 973 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 PPP1R13LQ8WUF5 828 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 KLHL6Q8WZ60 621 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 ATG4CQ96DT6 458 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 TMEM87BQ96K49 555 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 CDC6Q99741 560 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 SARGQ9BW04 601 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 INO80BQ9C086 356 aaPredicted RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 TRIT1Q9H3H1 467 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 CNNM2Q9H8M5 875 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 LUC7LQ9NQ29 371 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 NRBP1Q9UHY1 535 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 GPR160Q9UJ42 338 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 CNOT11Q9UKZ1 510 aaKnown RBP4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 PCDHB10Q9UN67 800 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 SLC12A7Q9Y666 1083 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 SCINQ9Y6U3 715 aa4.81□□□□□ -1.64
CLNS1A-208ENST00000527265 TNKSO95271 1327 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 TRBV23-1A0A0A0MS06 115 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 OR14I1A6ND48 311 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 CCER2I3L3R5 266 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 BRINP1O60477 761 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 ACRP10323 421 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 NME1P15531 152 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 RAG1P15918 1043 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 HTR3AP46098 478 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 YARSP54577 528 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 CHRNEQ04844 493 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 SLBPQ14493 270 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 DHCR24Q15392 516 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 NR0B2Q15466 257 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 SYDE2Q5VT97 1194 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 CDCP2Q5VXM1 449 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 ANO1Q5XXA6 986 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 SLC6A19Q695T7 634 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 KIAA1211LQ6NV74 962 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 LETMD1Q6P1Q0 360 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 HHIPL2Q6UWX4 724 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 UNC5AQ6ZN44 842 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 MORC1Q86VD1 984 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 MRPL41Q8IXM3 137 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 AHI1Q8N157 1196 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 PJA1Q8NG27 643 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 RUNDC1Q96C34 613 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 STRBPQ96SI9 672 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 DPH2Q9BQC3 489 aaPredicted RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 PAGR1Q9BTK6 254 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 ZHX3Q9H4I2 956 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 PHAXQ9H814 394 aaKnown RBP4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 JADE2Q9NQC1 790 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 PRDM11Q9NQV5 511 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 IP6K2Q9UHH9 426 aa4.8□□□□□ -1.64
CLNS1A-208ENST00000527265 TRAV20A0A0B4J274 112 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 A0A1W2PQU0 124 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 FAM86C2PA6NEL3 165 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 RASSF10A6NK89 507 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 K7ESM1 405 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 TNFRSF10CO14798 259 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 MYL3P08590 195 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 FAM163BP0C2L3 166 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 SERPINB3P29508 390 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 POLR2BP30876 1174 aaKnown RBP4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 SRSF3P84103 164 aaKnown RBP4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 TNK2Q07912 1038 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 OLFML2BQ68BL8 750 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 TPH2Q8IWU9 490 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 SLFN12Q8IYM2 578 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 PANK1Q8TE04 598 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 USP33Q8TEY7 942 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 SLC9A7Q96T83 725 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 AS3MTQ9HBK9 375 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 LUZP4Q9P127 313 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 PUF60Q9UHX1 559 aaKnown RBP4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 SPEF1Q9Y4P9 236 aa4.79□□□□□ -1.64
CLNS1A-208ENST00000527265 AGRPO00253 132 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 KPNA6O60684 536 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 FBXO21O94952 628 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 NPTXRO95502 500 aa4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 CST3P01034 146 aaPredicted RBP4.78□□□□□ -1.64
CLNS1A-208ENST00000527265 HSP90AA1P07900 732 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms