RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 GNPTABQ3T906 1256 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 CELF3Q5SZQ8 465 aaKnown RBP18.52■□□□□ 0.56
CTSB-213ENST00000527215 MYSM1Q5VVJ2 828 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 WWC2Q6AWC2 1192 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 C16orf59Q7L2K0 433 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 PPTC7Q8NI37 304 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 KAT2BQ92831 832 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 BRF1Q92994 677 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 FAM217BQ9NTX9 383 aaPredicted RBP18.52■□□□□ 0.56
CTSB-213ENST00000527215 RTEL1Q9NZ71 1219 aa18.52■□□□□ 0.56
CTSB-213ENST00000527215 KAT6AQ92794 2004 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 ACRP10323 421 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 CCL23P55773 120 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 PTPN11Q06124 597 aaPredicted RBP18.51■□□□□ 0.55
CTSB-213ENST00000527215 PCNX4Q63HM2 1172 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 FAM161BQ96MY7 647 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 SPATA33Q96N06 139 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 GUCD1Q96NT3 240 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 INPP4AQ96PE3 977 aaPredicted RBP18.51■□□□□ 0.55
CTSB-213ENST00000527215 WNT8AQ9H1J5 351 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 COL6A3P12111 3177 aa18.51■□□□□ 0.55
CTSB-213ENST00000527215 EPB41L2O43491 1005 aaKnown RBP18.5■□□□□ 0.55
CTSB-213ENST00000527215 ZNF286BP0CG31 522 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 PSMA5P28066 241 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 ICAM3P32942 547 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.551e-8■■■■■ 33.2
CTSB-213ENST00000527215 SEMA3FQ13275 785 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 HSDL1Q3SXM5 330 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 TMEM240Q5SV17 173 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 BCAS3Q9H6U6 928 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 IL23AQ9NPF7 189 aa18.5■□□□□ 0.55
CTSB-213ENST00000527215 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
CTSB-213ENST00000527215 SPATA31C2B4DYI2 1134 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 FIBPO43427 364 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 F2P00734 622 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 HOXD8P13378 290 aaPredicted RBP18.49■□□□□ 0.55
CTSB-213ENST00000527215 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
CTSB-213ENST00000527215 PSEN2P49810 448 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 NAPAP54920 295 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 TYW1BQ6NUM6 668 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 XRRA1Q6P2D8 792 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 ZNF365Q70YC5 407 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 SCLYQ96I15 445 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 ALG1Q9BT22 464 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 AGXT2Q9BYV1 514 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 NID2Q14112 1375 aa18.49■□□□□ 0.55
CTSB-213ENST00000527215 TMEM265A0A087WTH1 108 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 SPDYE3A6NKU9 549 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 STXBP3O00186 592 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 PPFIA4O75335 1185 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 MFSD10Q14728 455 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 GDF6Q6KF10 455 aaPredicted RBP18.48■□□□□ 0.55
CTSB-213ENST00000527215 PPP1R18Q6NYC8 613 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 PSRC1Q6PGN9 363 aaPredicted RBP18.48■□□□□ 0.55
CTSB-213ENST00000527215 SESTD1Q86VW0 696 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 TET1Q8NFU7 2136 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 KATNAL1Q9BW62 490 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 PCDHA6Q9UN73 950 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 NOD1Q9Y239 953 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 PCDHA8Q9Y5H6 950 aa18.48■□□□□ 0.55
CTSB-213ENST00000527215 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 hCG_1984214I3L0E3 225 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 HAS3O00219 553 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 NEDD9Q14511 834 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 PTGISQ16647 500 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 KIAA0753Q2KHM9 967 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 RUFY3Q7L099 469 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 NLRX1Q86UT6 975 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 ZNF713Q8N859 430 aaPredicted RBP18.47■□□□□ 0.55
CTSB-213ENST00000527215 C7orf31Q8N865 590 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 RIC8AQ9NPQ8 531 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 HDAC6Q9UBN7 1215 aa18.47■□□□□ 0.55
CTSB-213ENST00000527215 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
CTSB-213ENST00000527215 ADCY7P51828 1080 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 RASIP1Q5U651 963 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 METTL7BQ6UX53 244 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 CTAGE1Q96RT6 745 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 SEMA6BQ9H3T3 888 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 ZSWIM6Q9HCJ5 1215 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 GTF2IRD1Q9UHL9 959 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 PTPRSQ13332 1948 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 CUL9Q8IWT3 2517 aa18.46■□□□□ 0.55
CTSB-213ENST00000527215 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.45■□□□□ 0.54
CTSB-213ENST00000527215 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.45■□□□□ 0.54
CTSB-213ENST00000527215 SMCO2A6NFE2 343 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 PITPNM1O00562 1244 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 FGBP02675 491 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 ITGB5P18084 799 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 BFSP2Q13515 415 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
CTSB-213ENST00000527215 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
CTSB-213ENST00000527215 RPUSD2Q8IZ73 545 aaKnown RBP18.45■□□□□ 0.54
CTSB-213ENST00000527215 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 GPRASP2Q96D09 838 aa18.45■□□□□ 0.54
CTSB-213ENST00000527215 VWCEQ96DN2 955 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms