RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 CTAGE1Q96RT6 745 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 BMP2KQ9NSY1 1161 aaPredicted RBP18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 VWA5AO00534 786 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 USP2O75604 605 aaPredicted RBP18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 SPIRE1Q08AE8 756 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 CEP55Q53EZ4 464 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 CDKAL1Q5VV42 579 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 UNC13DQ70J99 1090 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 KCNK18Q7Z418 384 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 ZNF710Q8N1W2 664 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 ANKRD7Q92527 254 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 DHTKD1Q96HY7 919 aaPredicted RBP18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 SSC5DA1L4H1 1573 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 KIF2AO00139 706 aaPredicted RBP18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 NFIBO00712 420 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 UBXN2AP68543 259 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 LRMPQ12912 555 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 HOMER2Q9NSB8 354 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 PPP1R12BO60237 982 aaPredicted RBP18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 TNNT1P13805 278 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 HOXA7P31268 230 aaPredicted RBP18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 GHRHRQ02643 423 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 DYMQ7RTS9 669 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 VSTM4Q8IW00 320 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 DDX12PQ92771 950 aa18.1■□□□□ 0.49
SNRNP35-204ENST00000527158 POTEB3A0JP26 581 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 POTECB2RU33 542 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 RPA1P27694 616 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 SPAG1Q07617 926 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 COG2Q14746 738 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 FILIP1LQ4L180 1135 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 POTEBQ6S5H4 581 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 CCDC150Q8NCX0 1101 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 ANKRD20A12PQ8NF67 263 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 RBM46Q8TBY0 533 aaKnown RBP18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 VAV3Q9UKW4 847 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 AFG3L2Q9Y4W6 797 aa18.09■□□□□ 0.49
SNRNP35-204ENST00000527158 MED24O75448 989 aa18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 SSBP05455 408 aaKnown RBP eCLIP18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 IDEP14735 1019 aa18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 STK4Q13043 487 aa18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 CATSPER3Q86XQ3 398 aa18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 TRERF1Q96PN7 1200 aa18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 ZMYND15Q9H091 742 aa18.08■□□□□ 0.49
SNRNP35-204ENST00000527158 E9PMD0 336 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 MEIS1O00470 390 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 COBLO75128 1261 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 PLA2G4BP0C869 781 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 PSMD2Q13200 908 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 ARID5BQ14865 1188 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 COBLL1Q53SF7 1204 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 LRCH2Q5VUJ6 765 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 KRT26Q7Z3Y9 468 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 DNM3Q9UQ16 869 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 CSADQ9Y600 493 aa18.08■□□□□ 0.48
SNRNP35-204ENST00000527158 A0A1B0GTH6 734 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 BICDL2A1A5D9 508 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 ADM5C9JUS6 153 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 NRDCO43847 1150 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 TUBB4AP04350 444 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 DSG3P32926 999 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 OAZ1P54368 228 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 NR1I3Q14994 352 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 INTS13Q9NVM9 706 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 UTRNP46939 3433 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 RPTORQ8N122 1335 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 FCER1AP12319 257 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 VGLL4Q14135 290 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 CATSPERGQ6ZRH7 1159 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 USP50Q70EL3 339 aaPredicted RBP18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 OTOP1Q7RTM1 612 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 KCTD17Q8N5Z5 321 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 SYTL5Q8TDW5 730 aaPredicted RBP18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 MXRA8Q9BRK3 442 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 ZNF577Q9BSK1 485 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 POLR3CQ9BUI4 534 aaPredicted RBP18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 COL20A1Q9P218 1284 aa18.07■□□□□ 0.48
SNRNP35-204ENST00000527158 POTEFA5A3E0 1075 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 GAS7O60861 476 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 PSMD10O75832 226 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 SKILP12757 684 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 IREB2P48200 963 aaKnown RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 POTEGQ6S5H5 508 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 POTEEQ6S8J3 1075 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 RNF207Q6ZRF8 634 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 NOC3LQ8WTT2 800 aaKnown RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 P2RX5Q93086 422 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 L3MBTL3Q96JM7 780 aaPredicted RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 TRIM47Q96LD4 638 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms