RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 HDAC6Q9UBN7 1215 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 EVPLQ92817 2033 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 NR3C2P08235 984 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 CKBP12277 381 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 HOMER1Q86YM7 354 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
CAPN1-204ENST00000526468 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-204ENST00000526468 CTNNA3Q9UI47 895 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
CAPN1-204ENST00000526468 COG5Q9UP83 839 aa13.63□□□□□ -0.23
CAPN1-204ENST00000526468 OPLAHO14841 1288 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 NBNO60934 754 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 EIF3JO75822 258 aaKnown RBP13.62□□□□□ -0.23
CAPN1-204ENST00000526468 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
CAPN1-204ENST00000526468 CXCL10P02778 98 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 BMP1P13497 986 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 POU3F3P20264 500 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-204ENST00000526468 UBA1P22314 1058 aaKnown RBP13.62□□□□□ -0.23
CAPN1-204ENST00000526468 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-204ENST00000526468 HSD17B4P51659 736 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 LAMC2Q13753 1193 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 STAG2Q8N3U4 1231 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 IL31RAQ8NI17 732 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 WNT8BQ93098 351 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 OSBPL3Q9H4L5 887 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 ZSWIM5Q9P217 1185 aa13.62□□□□□ -0.23
CAPN1-204ENST00000526468 TTC3P53804 2025 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 KLRF2D3W0D1 207 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 RBAK-RBAKDNI3L0D1 243 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 ZBTB5O15062 677 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 PPP1R11O60927 126 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-204ENST00000526468 GGPS1O95749 300 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 NUCB1Q02818 461 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 PTK7Q13308 1070 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 AAMPQ13685 434 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 TCTN1Q2MV58 587 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 HLA-CQ95604 372 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 SPATA33Q96N06 139 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 PDCD2LQ9BRP1 358 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 PCDHA1Q9Y5I3 950 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
CAPN1-204ENST00000526468 ABHD14A-ACY1A0A1B0GW23 586 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 HAS3O00219 553 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 LPXNO60711 386 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 EFCAB14O75071 495 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 GJB5O95377 273 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 CCND2P30279 289 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 ZNF200P98182 395 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-204ENST00000526468 GHRHRQ02643 423 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 GPNMBQ14956 572 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 PGM5Q15124 567 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 ZNF618Q5T7W0 954 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 TGS1Q96RS0 853 aaKnown RBP13.6□□□□□ -0.23
CAPN1-204ENST00000526468 C1QTNF1Q9BXJ1 281 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 IL25Q9H293 177 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 PLXNA4Q9HCM2 1894 aa13.6□□□□□ -0.23
CAPN1-204ENST00000526468 LGR5O75473 907 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 RGS20O76081 388 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 CTSHP09668 335 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-204ENST00000526468 THPOP40225 353 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 IRX6P78412 446 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-204ENST00000526468 TRDNQ13061 729 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 IKBKEQ14164 716 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 NBR1Q14596 966 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 SEC23AQ15436 765 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 TRIM71Q2Q1W2 868 aaKnown RBP13.59□□□□□ -0.23
CAPN1-204ENST00000526468 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 CELF3Q5SZQ8 465 aaKnown RBP13.59□□□□□ -0.23
CAPN1-204ENST00000526468 KCNV1Q6PIU1 500 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 TRAF7Q6Q0C0 670 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 FCHSD1Q86WN1 690 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-204ENST00000526468 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-204ENST00000526468 MAD2L2Q9UI95 211 aa13.59□□□□□ -0.23
CAPN1-204ENST00000526468 PIEZO1Q92508 2521 aa13.58□□□□□ -0.23
CAPN1-204ENST00000526468 ERICH2A1L162 156 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-204ENST00000526468 NOP56O00567 594 aaKnown RBP13.58□□□□□ -0.24
CAPN1-204ENST00000526468 IGHDP01880 384 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 AMHP03971 560 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 POLR2MP0CAP2 368 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 GRM4Q14833 912 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
CAPN1-204ENST00000526468 PIGSQ96S52 555 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 RAD9AQ99638 391 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 MLXIPQ9HAP2 919 aa13.58□□□□□ -0.24
CAPN1-204ENST00000526468 FNDC1Q4ZHG4 1894 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-204ENST00000526468 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 C17orf102A2RUQ5 167 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 LGALS2P05162 132 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms