RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ICA1Q05084 483 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 PLS1Q14651 629 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 SHROOM1Q2M3G4 852 aaPredicted RBP10.91□□□□□ -0.66
USP35-201ENST00000526425 FKBP15Q5T1M5 1219 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 E4F1Q66K89 784 aaPredicted RBP10.91□□□□□ -0.66
USP35-201ENST00000526425 NCAPH2Q6IBW4 605 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 CC2D1AQ6P1N0 951 aaPredicted RBP10.91□□□□□ -0.66
USP35-201ENST00000526425 CACNA2D4Q7Z3S7 1137 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 FAM204AQ9H8W3 233 aa10.91□□□□□ -0.66
USP35-201ENST00000526425 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
USP35-201ENST00000526425 SF3A3Q12874 501 aaKnown RBP eCLIP10.9□□□□□ -0.662e-7■■■■■ 27.2
USP35-201ENST00000526425 LONRF2Q1L5Z9 754 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 GNPTABQ3T906 1256 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 CEP85LQ5SZL2 805 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 STRIP1Q5VSL9 837 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 TOGARAM2Q6ZUX3 1019 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 SHISA4Q96DD7 197 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 HINFPQ9BQA5 517 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 DDX4Q9NQI0 724 aaKnown RBP10.9□□□□□ -0.66
USP35-201ENST00000526425 DISC1Q9NRI5 854 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 BARHL2Q9NY43 387 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 PIM2Q9P1W9 311 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 ZBTB21Q9ULJ3 1066 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 SCN7AQ01118 1682 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 SPDYE3A6NKU9 549 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 ARHGAP6O43182 974 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 SETSIPP0DME0 302 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 LONP1P36776 959 aaKnown RBP10.9□□□□□ -0.66
USP35-201ENST00000526425 PPP2R3AQ06190 1150 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 R3HDM1Q15032 1099 aaKnown RBP10.9□□□□□ -0.66
USP35-201ENST00000526425 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 SAAL1Q96ER3 474 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 PYM1Q9BRP8 204 aaKnown RBP10.9□□□□□ -0.66
USP35-201ENST00000526425 HOMER2Q9NSB8 354 aa10.9□□□□□ -0.66
USP35-201ENST00000526425 FAM207AQ9NSI2 230 aaPredicted RBP10.9□□□□□ -0.66
USP35-201ENST00000526425 B4DLN1 442 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 DDX39AO00148 427 aaKnown RBP10.9□□□□□ -0.67
USP35-201ENST00000526425 STXBP3O00186 592 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 MEIS1O00470 390 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 ADCY2Q08462 1091 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 PRR16Q569H4 304 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 MAEAQ7L5Y9 396 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 CCDC84Q86UT8 332 aaPredicted RBP10.9□□□□□ -0.67
USP35-201ENST00000526425 CPXCR1Q8N123 301 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.67
USP35-201ENST00000526425 KIFC2Q96AC6 838 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 CAPZA3Q96KX2 299 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 CSRNP1Q96S65 589 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 NOC4LQ9BVI4 516 aaKnown RBP10.9□□□□□ -0.67
USP35-201ENST00000526425 PARD6BQ9BYG5 372 aa10.9□□□□□ -0.67
USP35-201ENST00000526425 LUC7L2Q9Y383 392 aaKnown RBP10.9□□□□□ -0.67
USP35-201ENST00000526425 TRAF5O00463 557 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 TRAF1Q13077 416 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 KRT31Q15323 416 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 DBN1Q16643 649 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
USP35-201ENST00000526425 TRIML1Q8N9V2 468 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 ATL2Q8NHH9 583 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 SHTN1A0MZ66 631 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 UPP2O95045 317 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 SPAG1Q07617 926 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 FUT2Q10981 343 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 ZNF483Q8TF39 744 aaPredicted RBP10.89□□□□□ -0.67
USP35-201ENST00000526425 CUL5Q93034 780 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 LRP5O75197 1615 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 SNUPNO95149 360 aaKnown RBP10.89□□□□□ -0.67
USP35-201ENST00000526425 GH2P01242 217 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 FCER1AP12319 257 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 MATR3P43243 847 aaKnown RBP eCLIP10.89□□□□□ -0.67
USP35-201ENST00000526425 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 COPB1P53618 953 aaKnown RBP10.89□□□□□ -0.67
USP35-201ENST00000526425 RCAN1P53805 252 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 ETF1P62495 437 aaKnown RBP10.89□□□□□ -0.67
USP35-201ENST00000526425 KCNB1Q14721 858 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 C3orf20Q8ND61 904 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 PSMB7Q99436 277 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 KANSL2Q9H9L4 492 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 MTMR4Q9NYA4 1195 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 DDX25Q9UHL0 483 aaKnown RBP10.89□□□□□ -0.67
USP35-201ENST00000526425 PCDHA12Q9UN75 941 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 AKAP11Q9UKA4 1901 aa10.89□□□□□ -0.67
USP35-201ENST00000526425 DDX60Q8IY21 1712 aaKnown RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 EEF2P13639 858 aaKnown RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 HERC4Q5GLZ8 1057 aaPredicted RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 C16orf86Q6ZW13 317 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 BCAS4Q8TDM0 211 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 DYDC1Q8WWB3 177 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 OSBPL5Q9H0X9 879 aaPredicted RBP10.88□□□□□ -0.67
USP35-201ENST00000526425 MYO6Q9UM54 1294 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 ZEB2O60315 1214 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 OATP04181 439 aa10.88□□□□□ -0.67
USP35-201ENST00000526425 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms