RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RBM10P98175 930 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 CYP4F3Q08477 520 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 NFATC3Q12968 1075 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 PPP2R5EQ16537 467 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 KIAA1211LQ6NV74 962 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 TRMT10BQ6PF06 316 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 TEPPQ6URK8 271 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 KLHL36Q8N4N3 616 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 NPLOC4Q8TAT6 608 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 FRS2Q8WU20 508 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 TRMT2BQ96GJ1 504 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 TOE1Q96GM8 510 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 LGR4Q9BXB1 951 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 DTLQ9NZJ0 730 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 C11orf21Q9P2W6 132 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 FTSJ1Q9UET6 329 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 ZNF652Q9Y2D9 606 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 TIMM13Q9Y5L4 95 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 X6R8D5 127 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 ANKRD34BA5PLL1 514 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 ARNTLO00327 626 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 LRG1P02750 347 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 GIPRP48546 466 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 RACK1P63244 317 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 FOXE3Q13461 319 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 GTF2IRD2BQ6EKJ0 949 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 TMC5Q6UXY8 1006 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 GTF2IRD2Q86UP8 949 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 Q8N1Y9 231 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 C19orf47Q8N9M1 422 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 BVESQ8NE79 360 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 GNRHR2Q96P88 292 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 BARX1Q9HBU1 254 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 TMEFF2Q9UIK5 374 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 FBXL7Q9UJT9 491 aa4.91□□□□□ -1.62
ECHDC1-219ENST00000526299 TCRBV5S2A0A599 114 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 CYP7B1O75881 506 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 FANCCQ00597 558 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 CCDC103Q8IW40 242 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 NUDT10Q8NFP7 164 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 NUDT11Q96G61 164 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 CYP26B1Q9NR63 512 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 RBPJLQ9UBG7 517 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 DDX41Q9UJV9 622 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 ADAM29Q9UKF5 820 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 EFR3BQ9Y2G0 817 aa4.9□□□□□ -1.63
ECHDC1-219ENST00000526299 HGSO14964 777 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 FOXS1O43638 330 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 CNOT4O95628 575 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 COL9A2Q14055 689 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 PHF19Q5T6S3 580 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 POMZP3Q6PJE2 187 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 VHLLQ6RSH7 139 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 CRACR2BQ8N4Y2 399 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 PPP1R14AQ96A00 147 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 CHFRQ96EP1 664 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 TMEM169Q96HH4 297 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 TMEM209Q96SK2 561 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 APBA2Q99767 749 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 NKX2-4Q9H2Z4 354 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 COA3Q9Y2R0 106 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 PCDHB4Q9Y5E5 795 aa4.89□□□□□ -1.63
ECHDC1-219ENST00000526299 NOP56O00567 594 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 COL6A1P12109 1028 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 PAK2Q13177 524 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 PRKD1Q15139 912 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 SMN1Q16637 294 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 NRN1LQ496H8 165 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 MIIPQ5JXC2 388 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 STEAP3Q658P3 488 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 IQCEQ6IPM2 695 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 TCTN3Q6NUS6 607 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 RNF207Q6ZRF8 634 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 TRIM59Q8IWR1 403 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 OR6P1Q8NGX9 317 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 DIO2Q92813 273 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 WRNIP1Q96S55 665 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 ADOQ96SZ5 270 aa4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 METTL5Q9NRN9 209 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-219ENST00000526299 TADA3O75528 432 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 ZNF16P17020 682 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 SOX9P48436 509 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 GTF2A2P52657 109 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 HS1BP3Q53T59 392 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 RALYLQ86SE5 291 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 ZNF654Q8IZM8 581 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 RCBTB1Q8NDN9 531 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 MRGPRX3Q96LB0 322 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 LRRC37BQ96QE4 947 aa4.87□□□□□ -1.63
ECHDC1-219ENST00000526299 MYO1BO43795 1136 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 KLHL18O94889 574 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 ZNF202O95125 648 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 INHBEP58166 350 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 DGCR2P98153 550 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 ABHD18Q0P651 414 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 CHRNA2Q15822 529 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 USP39Q53GS9 565 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 E4F1Q66K89 784 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms