RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 EPB41L1Q9H4G0 881 aa8.46□□□□□ -1.06
COPB1-204ENST00000526191 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
COPB1-204ENST00000526191 ZNF652Q9Y2D9 606 aa8.46□□□□□ -1.06
COPB1-204ENST00000526191 SH3D21A4FU49 640 aa8.45□□□□□ -1.06
COPB1-204ENST00000526191 HGSO14964 777 aaPredicted RBP8.45□□□□□ -1.06
COPB1-204ENST00000526191 RASGRF1Q13972 1273 aa8.45□□□□□ -1.06
COPB1-204ENST00000526191 ARRDC4Q8NCT1 418 aa8.45□□□□□ -1.06
COPB1-204ENST00000526191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.45□□□□□ -1.06
COPB1-204ENST00000526191 DCAF4Q8WV16 495 aa8.45□□□□□ -1.06
COPB1-204ENST00000526191 TCRBV5S2A0A599 114 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 TADA3O75528 432 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 KCNC1P48547 511 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 IFRD2Q12894 506 aaPredicted RBP8.44□□□□□ -1.06
COPB1-204ENST00000526191 CR1LQ2VPA4 569 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 MTERF2Q49AM1 385 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 EMC4Q5J8M3 183 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 NBPF6Q5VWK0 638 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 RSPO2Q6UXX9 243 aaPredicted RBP8.44□□□□□ -1.06
COPB1-204ENST00000526191 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 ZNF669Q96BR6 464 aaPredicted RBP8.44□□□□□ -1.06
COPB1-204ENST00000526191 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 C11orf84Q9BUA3 381 aaPredicted RBP8.44□□□□□ -1.06
COPB1-204ENST00000526191 PCDHB4Q9Y5E5 795 aa8.44□□□□□ -1.06
COPB1-204ENST00000526191 ADCY3O60266 1144 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 DIAPH1O60610 1272 aaKnown RBP8.43□□□□□ -1.06
COPB1-204ENST00000526191 DGKIO75912 1065 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 CHRNA2Q15822 529 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 ZC3H18Q86VM9 953 aaKnown RBP8.43□□□□□ -1.06
COPB1-204ENST00000526191 CARFQ8N187 725 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 CCDC113Q9H0I3 377 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 ADAM7Q9H2U9 754 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 RTEL1Q9NZ71 1219 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 ASXL2Q76L83 1435 aa8.43□□□□□ -1.06
COPB1-204ENST00000526191 ITGA1P56199 1179 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
COPB1-204ENST00000526191 SERINC3Q13530 473 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 FOXB2Q5VYV0 432 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 LBX2Q6XYB7 198 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 KRTAP4-7Q9BYR0 210 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 SIRPGQ9P1W8 387 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 MYOTQ9UBF9 498 aa8.42□□□□□ -1.06
COPB1-204ENST00000526191 NFIXQ14938 502 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 STYK1Q6J9G0 422 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 KYQ8NBH2 561 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 PIP4K2CQ8TBX8 421 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 RELTQ969Z4 430 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 HIRIP3Q9BW71 556 aaPredicted RBP8.41□□□□□ -1.06
COPB1-204ENST00000526191 DTLQ9NZJ0 730 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 NTMQ9P121 344 aa8.41□□□□□ -1.06
COPB1-204ENST00000526191 SMARCA5O60264 1052 aaPredicted RBP8.4□□□□□ -1.06
COPB1-204ENST00000526191 GRK2P25098 689 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 THBS2P35442 1172 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 GRK3P35626 688 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 SARSP49591 514 aaKnown RBP8.4□□□□□ -1.06
COPB1-204ENST00000526191 GPR85P60893 370 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 RASA3Q14644 834 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 FAM209AQ5JX71 171 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 NT5DC1Q5TFE4 455 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 KCNJ15Q99712 375 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 SMOC1Q9H4F8 434 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 TRAF6Q9Y4K3 522 aa8.4□□□□□ -1.06
COPB1-204ENST00000526191 FAM221BA6H8Z2 402 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 SLC27A2O14975 620 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 COL6A2P12110 1019 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 NKX3-2P78367 333 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 RBL2Q08999 1139 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 ADAM9Q13443 819 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 KIZQ2M2Z5 673 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 TTLL7Q6ZT98 887 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 RBM12BQ8IXT5 1001 aaKnown RBP8.39□□□□□ -1.07
COPB1-204ENST00000526191 IFNL3Q8IZI9 196 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 ARMC5Q96C12 935 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 TOE1Q96GM8 510 aaKnown RBP8.39□□□□□ -1.07
COPB1-204ENST00000526191 ZFYVE21Q9BQ24 234 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 SLC6A20Q9NP91 592 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 NACADO15069 1562 aa8.39□□□□□ -1.07
COPB1-204ENST00000526191 B8ZZF3 427 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 KRIT1O00522 736 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 FOXD2O60548 495 aaPredicted RBP8.38□□□□□ -1.07
COPB1-204ENST00000526191 LRG1P02750 347 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 FAM153BP0C7A2 387 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 TEPPQ6URK8 271 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 OTOP3Q7RTS5 596 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 ZBTB38Q8NAP3 1195 aaPredicted RBP8.38□□□□□ -1.07
COPB1-204ENST00000526191 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.38□□□□□ -1.07
COPB1-204ENST00000526191 PHOSPHO1Q8TCT1 267 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 EXOC2Q96KP1 924 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 DEPDC7Q96QD5 511 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 CDC6Q99741 560 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 ASH2LQ9UBL3 628 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 WASF3Q9UPY6 502 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 BICRAQ9NZM4 1560 aa8.38□□□□□ -1.07
COPB1-204ENST00000526191 TRBV23-1A0A0A0MS06 115 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 SOD2P04179 222 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 GRIN1Q05586 938 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 ZNF761Q86XN6 746 aaPredicted RBP8.37□□□□□ -1.07
COPB1-204ENST00000526191 SCUBE1Q8IWY4 988 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms