RNA–Protein interactions for RNA: ENST00000526124.1

LTBP3-205, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 5

Gene LTBP3, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-205	ENST00000526124	CCND3	P30281	292 aa	Predicted RBP	18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	ADCYAP1R1	P41586	468 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	SP2	Q02086	613 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	MTMR1	Q13613	665 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	PRR16	Q569H4	304 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	TTC38	Q5R3I4	469 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	LENG9	Q96B70	501 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	CDHR1	Q96JP9	859 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	HMX1	Q9NP08	348 aa	Predicted RBP	18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	CHMP5	Q9NZZ3	219 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	PCDHB6	Q9Y5E3	794 aa		18.82	■□□□□ 0.6
LTBP3-205	ENST00000526124	MCM3AP	O60318	1980 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	ATP9A	O75110	1047 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	ARIH2	O95376	493 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	TXN	P10599	105 aa	Known RBP	18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	TNFAIP2	Q03169	654 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	SEMA3F	Q13275	785 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	ORC2	Q13416	577 aa	Predicted RBP	18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	TTLL4	Q14679	1199 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	TMEM63B	Q5T3F8	832 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	MCOLN1	Q9GZU1	580 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	DDX25	Q9UHL0	483 aa	Known RBP	18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	MRVI1	Q9Y6F6	885 aa		18.81	■□□□□ 0.6
LTBP3-205	ENST00000526124	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	MSH4	O15457	936 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	SEPT4	O43236	478 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	SMPD1	P17405	629 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	MCM7	P33993	719 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	NBR1	Q14596	966 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	LY6K	Q17RY6	165 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	DUSP28	Q4G0W2	176 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	C4orf32	Q8N8J7	132 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	SENP7	Q9BQF6	1050 aa		18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	AGO4	Q9HCK5	861 aa	Known RBP	18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.8	■□□□□ 0.6
LTBP3-205	ENST00000526124	SLC37A4	O43826	429 aa		18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	AKR1A1	P14550	325 aa		18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	SET	Q01105	290 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	ARMC5	Q96C12	935 aa		18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	ZNF396	Q96N95	335 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	ZNF577	Q9BSK1	485 aa		18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	BCAS3	Q9H6U6	928 aa		18.79	■□□□□ 0.6
LTBP3-205	ENST00000526124	IPO5	O00410	1097 aa	Known RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	TBX3	O15119	743 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	NKRF	O15226	690 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	DHX15	O43143	795 aa	Known RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	BAG4	O95429	457 aa	Known RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	NEDD9	Q14511	834 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	MTFR1	Q15390	333 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	HAS1	Q92839	578 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	COPS5	Q92905	334 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	SLC5A5	Q92911	643 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	ZNF333	Q96JL9	665 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	FAM20A	Q96MK3	541 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	MTMR9	Q96QG7	549 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	UIMC1	Q96RL1	719 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	UNC93B1	Q9H1C4	597 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	KCNMB3	Q9NPA1	279 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	TBC1D22B	Q9NU19	505 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	TFIP11	Q9UBB9	837 aa	Known RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	GNE	Q9Y223	722 aa	Known RBP	18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124		Q9Y3F1	56 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	CLIC4	Q9Y696	253 aa		18.78	■□□□□ 0.6
LTBP3-205	ENST00000526124	KIAA1217	Q5T5P2	1943 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	ADCY6	O43306	1168 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	MARCH6	O60337	910 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	DUSP11	O75319	330 aa	Known RBP	18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	CCL5	P13501	91 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	KCNA2	P16389	499 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	PTGDR	Q13258	359 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	SF3A1	Q15459	793 aa	Known RBP	18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	CELF3	Q5SZQ8	465 aa	Known RBP	18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	ATL3	Q6DD88	541 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	POTED	Q86YR6	584 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	DHX37	Q8IY37	1157 aa	Known RBP	18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	ETNPPL	Q8TBG4	499 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	RIT2	Q99578	217 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	TMEM60	Q9H2L4	133 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	PKD2L1	Q9P0L9	805 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	ATP6V1D	Q9Y5K8	247 aa		18.77	■□□□□ 0.6
LTBP3-205	ENST00000526124	DYNC1LI2	O43237	492 aa	Predicted RBP	18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	NEMF	O60524	1076 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	PSMD10	O75832	226 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	GH1	P01241	217 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	UBA1	P22314	1058 aa	Known RBP	18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	ITGB3BP	Q13352	177 aa	Predicted RBP	18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	LAMC2	Q13753	1193 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	CALCRL	Q16602	461 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	GJC2	Q5T442	439 aa	Predicted RBP	18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	ANO1	Q5XXA6	986 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	LHX8	Q68G74	356 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	CYFIP1	Q7L576	1253 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	GJA10	Q969M2	543 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	USP28	Q96RU2	1077 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	RNF208	Q9H0X6	261 aa		18.76	■□□□□ 0.59
LTBP3-205	ENST00000526124	MLXIP	Q9HAP2	919 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 480.6 ms