RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 PBKQ96KB5 322 aa8.82□□□□□ -1
BDNF-213ENST00000525950 VCPKMTQ9H867 229 aa8.82□□□□□ -1
BDNF-213ENST00000525950 NFU1Q9UMS0 254 aa8.82□□□□□ -1
BDNF-213ENST00000525950 ATP6V0A2Q9Y487 856 aa8.82□□□□□ -1
BDNF-213ENST00000525950 COL4A1P02462 1669 aa8.81□□□□□ -1
BDNF-213ENST00000525950 MYMKA6NI61 221 aa8.81□□□□□ -1
BDNF-213ENST00000525950 KRT14P02533 472 aa8.81□□□□□ -1
BDNF-213ENST00000525950 MATR3P43243 847 aaKnown RBP eCLIP8.81□□□□□ -1
BDNF-213ENST00000525950 ACTN3Q08043 901 aaPredicted RBP8.81□□□□□ -1
BDNF-213ENST00000525950 SFMBT2Q5VUG0 894 aa8.81□□□□□ -1
BDNF-213ENST00000525950 SPTY2D1Q68D10 685 aaPredicted RBP8.81□□□□□ -1
BDNF-213ENST00000525950 CACNA2D4Q7Z3S7 1137 aa8.81□□□□□ -1
BDNF-213ENST00000525950 NLRP14Q86W24 1093 aa8.81□□□□□ -1
BDNF-213ENST00000525950 ZC3H3Q8IXZ2 948 aaKnown RBP8.81□□□□□ -1
BDNF-213ENST00000525950 USP38Q8NB14 1042 aa8.81□□□□□ -1
BDNF-213ENST00000525950 MYCBPAPQ8TBZ2 947 aa8.81□□□□□ -1
BDNF-213ENST00000525950 CASKIN2Q8WXE0 1202 aa8.81□□□□□ -1
BDNF-213ENST00000525950 LARP4BQ92615 738 aaKnown RBP8.81□□□□□ -1
BDNF-213ENST00000525950 P3H4Q92791 437 aa8.81□□□□□ -1
BDNF-213ENST00000525950 CCT8L2Q96SF2 557 aa8.81□□□□□ -1
BDNF-213ENST00000525950 PLIN2Q99541 437 aa8.81□□□□□ -1
BDNF-213ENST00000525950 TAF1DQ9H5J8 278 aaPredicted RBP8.81□□□□□ -1
BDNF-213ENST00000525950 SLC39A2Q9NP94 309 aa8.81□□□□□ -1
BDNF-213ENST00000525950 CAPN7Q9Y6W3 813 aa8.81□□□□□ -1
BDNF-213ENST00000525950 NKRFO15226 690 aaKnown RBP eCLIP8.81□□□□□ -1
BDNF-213ENST00000525950 CCNT1O60563 726 aaKnown RBP8.81□□□□□ -1
BDNF-213ENST00000525950 PAEPP09466 180 aa8.81□□□□□ -1
BDNF-213ENST00000525950 CXCR5P32302 372 aa8.81□□□□□ -1
BDNF-213ENST00000525950 SLC1A4P43007 532 aa8.81□□□□□ -1
BDNF-213ENST00000525950 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
BDNF-213ENST00000525950 GUCY2DQ02846 1103 aa8.81□□□□□ -1
BDNF-213ENST00000525950 GFPT1Q06210 699 aaPredicted RBP8.81□□□□□ -1
BDNF-213ENST00000525950 SPDYCQ5MJ68 293 aa8.81□□□□□ -1
BDNF-213ENST00000525950 SLC10A5Q5PT55 438 aa8.81□□□□□ -1
BDNF-213ENST00000525950 AGBL2Q5U5Z8 902 aa8.81□□□□□ -1
BDNF-213ENST00000525950 FBXW10Q5XX13 1052 aa8.81□□□□□ -1
BDNF-213ENST00000525950 HEATR3Q7Z4Q2 680 aa8.81□□□□□ -1
BDNF-213ENST00000525950 SCFD2Q8WU76 684 aa8.81□□□□□ -1
BDNF-213ENST00000525950 LRRC45Q96CN5 670 aa8.81□□□□□ -1
BDNF-213ENST00000525950 PNMA5Q96PV4 448 aa8.81□□□□□ -1
BDNF-213ENST00000525950 NIP7Q9Y221 180 aaKnown RBP eCLIP8.81□□□□□ -1
BDNF-213ENST00000525950 ZNF652Q9Y2D9 606 aa8.81□□□□□ -1
BDNF-213ENST00000525950 SAMM50Q9Y512 469 aa8.81□□□□□ -1
BDNF-213ENST00000525950 NCK2O43639 380 aa8.81□□□□□ -1
BDNF-213ENST00000525950 NOL4O94818 638 aa8.81□□□□□ -1
BDNF-213ENST00000525950 FAM153BP0C7A2 387 aa8.81□□□□□ -1
BDNF-213ENST00000525950 CYP2D6P10635 497 aa8.81□□□□□ -1
BDNF-213ENST00000525950 MNAT1P51948 309 aa8.81□□□□□ -1
BDNF-213ENST00000525950 FAM153CQ494X1 144 aa8.81□□□□□ -1
BDNF-213ENST00000525950 TMEM119Q4V9L6 283 aa8.81□□□□□ -1
BDNF-213ENST00000525950 MAGEC3Q8TD91 643 aa8.81□□□□□ -1
BDNF-213ENST00000525950 ACTRT1Q8TDG2 376 aa8.81□□□□□ -1
BDNF-213ENST00000525950 RAD54LQ92698 747 aa8.81□□□□□ -1
BDNF-213ENST00000525950 RAB34Q9BZG1 259 aa8.81□□□□□ -1
BDNF-213ENST00000525950 FAM153AQ9UHL3 310 aa8.81□□□□□ -1
BDNF-213ENST00000525950 COL4A3BPQ9Y5P4 624 aa8.81□□□□□ -1
BDNF-213ENST00000525950 C5orf60A6NFR6 353 aa8.8□□□□□ -1
BDNF-213ENST00000525950 H0YGN5 161 aa8.8□□□□□ -1
BDNF-213ENST00000525950 CHUKO15111 745 aa8.8□□□□□ -1
BDNF-213ENST00000525950 TLR2O60603 784 aa8.8□□□□□ -1
BDNF-213ENST00000525950 PALMO75781 387 aa8.8□□□□□ -1
BDNF-213ENST00000525950 RASSF9O75901 435 aa8.8□□□□□ -1
BDNF-213ENST00000525950 NOVP48745 357 aa8.8□□□□□ -1
BDNF-213ENST00000525950 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
BDNF-213ENST00000525950 FAM83BQ5T0W9 1011 aa8.8□□□□□ -1
BDNF-213ENST00000525950 RUFY4Q6ZNE9 571 aa8.8□□□□□ -1
BDNF-213ENST00000525950 NFS1Q9Y697 457 aa8.8□□□□□ -1
BDNF-213ENST00000525950 TECP42680 631 aa8.8□□□□□ -1
BDNF-213ENST00000525950 CRKLP46109 303 aaKnown RBP8.8□□□□□ -1
BDNF-213ENST00000525950 PPP4CP60510 307 aa8.8□□□□□ -1
BDNF-213ENST00000525950 EVX2Q03828 476 aa8.8□□□□□ -1
BDNF-213ENST00000525950 LETM2Q2VYF4 491 aa8.8□□□□□ -1
BDNF-213ENST00000525950 CERS3Q8IU89 383 aa8.8□□□□□ -1
BDNF-213ENST00000525950 SH2D3CQ8N5H7 860 aa8.8□□□□□ -1
BDNF-213ENST00000525950 MS4A14Q96JA4 679 aa8.8□□□□□ -1
BDNF-213ENST00000525950 ANKRD2Q9GZV1 360 aa8.8□□□□□ -1
BDNF-213ENST00000525950 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
BDNF-213ENST00000525950 SMARCAL1Q9NZC9 954 aa8.8□□□□□ -1
BDNF-213ENST00000525950 EHD2Q9NZN4 543 aa8.8□□□□□ -1
BDNF-213ENST00000525950 SMCO2A6NFE2 343 aa8.8□□□□□ -1
BDNF-213ENST00000525950 HIBADHP31937 336 aaKnown RBP8.8□□□□□ -1
BDNF-213ENST00000525950 MTMR3Q13615 1198 aa8.8□□□□□ -1
BDNF-213ENST00000525950 TMEM266Q2M3C6 531 aa8.8□□□□□ -1
BDNF-213ENST00000525950 MCM9Q9NXL9 1143 aa8.8□□□□□ -1
BDNF-213ENST00000525950 BZW2Q9Y6E2 419 aaKnown RBP8.8□□□□□ -1
BDNF-213ENST00000525950 GOLGA6L10A6NI86 522 aa8.79□□□□□ -1
BDNF-213ENST00000525950 CCDC188H7C350 402 aa8.79□□□□□ -1
BDNF-213ENST00000525950 NAPAP54920 295 aa8.79□□□□□ -1
BDNF-213ENST00000525950 HYIQ5T013 277 aa8.79□□□□□ -1
BDNF-213ENST00000525950 CCDC50Q8IVM0 306 aa8.79□□□□□ -1
BDNF-213ENST00000525950 MYOCDQ8IZQ8 938 aa8.79□□□□□ -1
BDNF-213ENST00000525950 SEC14L1Q92503 715 aa8.79□□□□□ -1
BDNF-213ENST00000525950 KRT12Q99456 494 aa8.79□□□□□ -1
BDNF-213ENST00000525950 TMEM47Q9BQJ4 181 aa8.79□□□□□ -1
BDNF-213ENST00000525950 SLC12A6Q9UHW9 1150 aa8.79□□□□□ -1
BDNF-213ENST00000525950 TMCO5BA8MYB1 307 aa8.79□□□□□ -1
BDNF-213ENST00000525950 KLRF2D3W0D1 207 aa8.79□□□□□ -1
BDNF-213ENST00000525950 BUB1O43683 1085 aa8.79□□□□□ -1
BDNF-213ENST00000525950 C21orf2O43822 256 aa8.79□□□□□ -1
BDNF-213ENST00000525950 KLRC1P26715 233 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms