RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 MYSM1Q5VVJ2 828 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 MFSD5Q6N075 450 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 TMEM199Q8N511 208 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 SPATA33Q96N06 139 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 TRPV6Q9H1D0 765 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 HIPK3Q9H422 1215 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 RIC8AQ9NPQ8 531 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 RTEL1Q9NZ71 1219 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 SCN10AQ9Y5Y9 1956 aa20.1■□□□□ 0.81
NR1H3-228ENST00000525441 SPATA31C2B4DYI2 1134 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 STXBP3O00186 592 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 FOSP01100 380 aaPredicted RBP20.09■□□□□ 0.81
NR1H3-228ENST00000525441 SCG2P13521 617 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 PDIA3P30101 505 aaKnown RBP20.09■□□□□ 0.81
NR1H3-228ENST00000525441 CHMP4BP1P59074 171 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 PPIGQ13427 754 aaKnown RBP eCLIP20.09■□□□□ 0.816e-8■■□□□ 11.5
NR1H3-228ENST00000525441 PFKFB3Q16875 520 aaPredicted RBP20.09■□□□□ 0.81
NR1H3-228ENST00000525441 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
NR1H3-228ENST00000525441 CDHR1Q96JP9 859 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 KATNAL1Q9BW62 490 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
NR1H3-228ENST00000525441 PPP1R12CQ9BZL4 782 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 PCDHA6Q9UN73 950 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 PCDHA8Q9Y5H6 950 aa20.09■□□□□ 0.81
NR1H3-228ENST00000525441 SMCO2A6NFE2 343 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 SOX1O00570 391 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-228ENST00000525441 PRPF3O43395 683 aaKnown RBP20.08■□□□□ 0.81
NR1H3-228ENST00000525441 PPFIA4O75335 1185 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 ANAPC15P60006 121 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 SP2Q02086 613 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 TOB2Q14106 344 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-228ENST00000525441 SHHQ15465 462 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 TYW1BQ6NUM6 668 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 GPRASP2Q96D09 838 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.81
NR1H3-228ENST00000525441 NOP56O00567 594 aaKnown RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 SORBS3O60504 671 aa20.07■□□□□ 0.8
NR1H3-228ENST00000525441 HOXD8P13378 290 aaPredicted RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 METTL7BQ6UX53 244 aa20.07■□□□□ 0.8
NR1H3-228ENST00000525441 GIMAP8Q8ND71 665 aaPredicted RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 SENP7Q9BQF6 1050 aa20.07■□□□□ 0.8
NR1H3-228ENST00000525441 NOC4LQ9BVI4 516 aaKnown RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 RNF26Q9BY78 433 aaPredicted RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 TRMT13Q9NUP7 481 aaKnown RBP20.07■□□□□ 0.8
NR1H3-228ENST00000525441 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
NR1H3-228ENST00000525441 IFNAR1P17181 557 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 CYP2C18P33260 490 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 PSEN2P49810 448 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 CCT2P78371 535 aaKnown RBP20.06■□□□□ 0.8
NR1H3-228ENST00000525441 AP3B2Q13367 1082 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 HSDL1Q3SXM5 330 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 C9orf50Q5SZB4 431 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 GPR153Q6NV75 609 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 SESTD1Q86VW0 696 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 KAT2BQ92831 832 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 LRCH3Q96II8 777 aa20.06■□□□□ 0.8
NR1H3-228ENST00000525441 ESYT2A0FGR8 921 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 CPLX1O14810 134 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 F2P00734 622 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 ZNF286BP0CG31 522 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 EPHB4P54760 987 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 SEMA3FQ13275 785 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 MFSD10Q14728 455 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 MCTP2Q6DN12 878 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
NR1H3-228ENST00000525441 TRIM22Q8IYM9 498 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 C7orf31Q8N865 590 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 PHKBQ93100 1093 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 RNPC3Q96LT9 517 aaKnown RBP20.05■□□□□ 0.8
NR1H3-228ENST00000525441 SLC26A6Q9BXS9 759 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 C6orf50Q9HD87 102 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 UBIAD1Q9Y5Z9 338 aa20.05■□□□□ 0.8
NR1H3-228ENST00000525441 MYH7BA7E2Y1 1941 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 MAFGO15525 162 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 CYP2C9P11712 490 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 CSF2RAP15509 400 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 MTMR1Q13613 665 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 NTRK3Q16288 839 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 CYFIP1Q7L576 1253 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 ALG1Q9BT22 464 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 ANO3Q9BYT9 981 aa20.04■□□□□ 0.8
NR1H3-228ENST00000525441 NCOA5Q9HCD5 579 aaKnown RBP20.04■□□□□ 0.8
NR1H3-228ENST00000525441 ITGB5P18084 799 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 GNA11P29992 359 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 BFSP2Q13515 415 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 PKN1Q16512 942 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 PTGISQ16647 500 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 KIAA0753Q2KHM9 967 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 PSRC1Q6PGN9 363 aaPredicted RBP20.03■□□□□ 0.8
NR1H3-228ENST00000525441 CCDC155Q8N6L0 562 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 RETREG2Q8NC44 543 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 CCDC148Q8NFR7 591 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 PPP1R13LQ8WUF5 828 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 ZMYND12Q9H0C1 365 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 IL23AQ9NPF7 189 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 JADE2Q9NQC1 790 aa20.03■□□□□ 0.8
NR1H3-228ENST00000525441 UMODL1Q5DID0 1318 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 HAS3O00219 553 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 CLK2P49760 499 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms