RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 TLK2Q86UE8 772 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
CTTN-209ENST00000525276 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 NSUN6Q8TEA1 469 aaKnown RBP13.19□□□□□ -0.3
CTTN-209ENST00000525276 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 UPF3BQ9BZI7 483 aaKnown RBP13.19□□□□□ -0.3
CTTN-209ENST00000525276 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
CTTN-209ENST00000525276 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 MYH6P13533 1939 aa13.19□□□□□ -0.3
CTTN-209ENST00000525276 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 MUC6Q6W4X9 2439 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 RFXAPO00287 272 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
CTTN-209ENST00000525276 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
CTTN-209ENST00000525276 EVCP57679 992 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 PSMC6P62333 389 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 TTLL4Q14679 1199 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 IQSEC1Q6DN90 963 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
CTTN-209ENST00000525276 SCLYQ96I15 445 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 IWS1Q96ST2 819 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
CTTN-209ENST00000525276 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 PCDHA11Q9Y5I1 949 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 NID2Q14112 1375 aa13.18□□□□□ -0.3
CTTN-209ENST00000525276 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 hCG_1642624A0A1W2PR95 340 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 SEC24BO95487 1268 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 POU3F3P20264 500 aaPredicted RBP13.17□□□□□ -0.3
CTTN-209ENST00000525276 CDC27P30260 824 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
CTTN-209ENST00000525276 FUT2Q10981 343 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
CTTN-209ENST00000525276 C8orf34Q49A92 452 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 KRT40Q6A162 431 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTTN-209ENST00000525276 CUL5Q93034 780 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 MTCH2Q9Y6C9 303 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 SCN10AQ9Y5Y9 1956 aa13.17□□□□□ -0.3
CTTN-209ENST00000525276 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
CTTN-209ENST00000525276 PDIA3P30101 505 aaKnown RBP13.16□□□□□ -0.3
CTTN-209ENST00000525276 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
CTTN-209ENST00000525276 STXBP2Q15833 593 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 SPRED2Q7Z698 418 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 ALDH8A1Q9H2A2 487 aaPredicted RBP13.16□□□□□ -0.3
CTTN-209ENST00000525276 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 SLC4A7Q9Y6M7 1214 aa13.16□□□□□ -0.3
CTTN-209ENST00000525276 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
CTTN-209ENST00000525276 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
CTTN-209ENST00000525276 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 PIK3CDO00329 1044 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 DYNC1LI2O43237 492 aaPredicted RBP13.15□□□□□ -0.3
CTTN-209ENST00000525276 CABYRO75952 493 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 NR3C2P08235 984 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
CTTN-209ENST00000525276 SMARCC2Q8TAQ2 1214 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.34e-7■□□□□ 9.5
CTTN-209ENST00000525276 ZNF274Q96GC6 653 aaPredicted RBP13.15□□□□□ -0.3
CTTN-209ENST00000525276 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 PSTPIP2Q9H939 334 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
CTTN-209ENST00000525276 Q9Y3F1 56 aa13.15□□□□□ -0.3
CTTN-209ENST00000525276 TANC1Q9C0D5 1861 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 TLL1O43897 1013 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 EIF3JO75822 258 aaKnown RBP13.14□□□□□ -0.31
CTTN-209ENST00000525276 CA3P07451 260 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 CYP2C9P11712 490 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
CTTN-209ENST00000525276 NAPAP54920 295 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
CTTN-209ENST00000525276 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
CTTN-209ENST00000525276 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 DUSP28Q4G0W2 176 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 LRFN3Q9BTN0 628 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
CTTN-209ENST00000525276 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
CTTN-209ENST00000525276 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
CTTN-209ENST00000525276 STXBP3O00186 592 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms