RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PTK7Q13308 1070 aa27.87■■■□□ 2.05
USP47-205ENST00000525257 AAMPQ13685 434 aa27.87■■■□□ 2.05
USP47-205ENST00000525257 WNT8BQ93098 351 aa27.87■■■□□ 2.05
USP47-205ENST00000525257 MTUS1Q9ULD2 1270 aa27.87■■■□□ 2.05
USP47-205ENST00000525257 KLRF2D3W0D1 207 aa27.86■■■□□ 2.05
USP47-205ENST00000525257 RGS20O76081 388 aa27.86■■■□□ 2.05
USP47-205ENST00000525257 TRIM71Q2Q1W2 868 aaKnown RBP27.86■■■□□ 2.05
USP47-205ENST00000525257 HLA-CQ95604 372 aa27.86■■■□□ 2.05
USP47-205ENST00000525257 PDCD2LQ9BRP1 358 aa27.86■■■□□ 2.05
USP47-205ENST00000525257 ABHD14A-ACY1A0A1B0GW23 586 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 GJB5O95377 273 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 HOXA13P31271 388 aaPredicted RBP27.85■■■□□ 2.05
USP47-205ENST00000525257 GHRHRQ02643 423 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 ZNF618Q5T7W0 954 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 FAM117BQ6P1L5 589 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 TRAF7Q6Q0C0 670 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 MAD2L2Q9UI95 211 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 PCDHA1Q9Y5I3 950 aa27.85■■■□□ 2.05
USP47-205ENST00000525257 ZBTB5O15062 677 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 GGPS1O95749 300 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 MBTPS1Q14703 1052 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 HSDL1Q3SXM5 330 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 MYSM1Q5VVJ2 828 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 IL31RAQ8NI17 732 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 MTMR8Q96EF0 704 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 SPATA33Q96N06 139 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 RAD9AQ99638 391 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 IL25Q9H293 177 aa27.84■■■□□ 2.05
USP47-205ENST00000525257 HOXD8P13378 290 aaPredicted RBP27.83■■■□□ 2.05
USP47-205ENST00000525257 IKBKEQ14164 716 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 HIC1Q14526 733 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 PGM5Q15124 567 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 SEC23AQ15436 765 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 CELF3Q5SZQ8 465 aaKnown RBP27.83■■■□□ 2.05
USP47-205ENST00000525257 STOX1Q6ZVD7 989 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 CYB5R4Q7L1T6 521 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 HOMER1Q86YM7 354 aa27.83■■■□□ 2.05
USP47-205ENST00000525257 ZFP91Q96JP5 570 aaPredicted RBP27.83■■■□□ 2.05
USP47-205ENST00000525257 EFCAB14O75071 495 aa27.82■■■□□ 2.04
USP47-205ENST00000525257 KCNV1Q6PIU1 500 aa27.82■■■□□ 2.04
USP47-205ENST00000525257 VSIG10LQ86VR7 867 aa27.82■■■□□ 2.04
USP47-205ENST00000525257 C1QTNF1Q9BXJ1 281 aa27.82■■■□□ 2.04
USP47-205ENST00000525257 MAP3K20Q9NYL2 800 aaKnown RBP27.82■■■□□ 2.04
USP47-205ENST00000525257 SIP14410 1827 aa27.81■■■□□ 2.04
USP47-205ENST00000525257 LINC01553A4QN01 128 aa27.81■■■□□ 2.04
USP47-205ENST00000525257 PPFIA4O75335 1185 aa27.81■■■□□ 2.04
USP47-205ENST00000525257 UBA1P22314 1058 aaKnown RBP27.81■■■□□ 2.04
USP47-205ENST00000525257 SP2Q02086 613 aa27.81■■■□□ 2.04
USP47-205ENST00000525257 GPKOWQ92917 476 aaPredicted RBP eCLIP27.81■■■□□ 2.04
USP47-205ENST00000525257 TGS1Q96RS0 853 aaKnown RBP27.81■■■□□ 2.04
USP47-205ENST00000525257 SUGCTQ9HAC7 445 aa27.81■■■□□ 2.04
USP47-205ENST00000525257 BRWD1Q9NSI6 2320 aa27.81■■■□□ 2.04
USP47-205ENST00000525257 PALM3A6NDB9 673 aaPredicted RBP27.8■■■□□ 2.04
USP47-205ENST00000525257 LGR5O75473 907 aa27.8■■■□□ 2.04
USP47-205ENST00000525257 ERVK-21P61565 698 aa27.8■■■□□ 2.04
USP47-205ENST00000525257 SLC35G1Q2M3R5 365 aa27.8■■■□□ 2.04
USP47-205ENST00000525257 LMCD1Q9NZU5 365 aa27.8■■■□□ 2.04
USP47-205ENST00000525257 CCND2P30279 289 aa27.79■■■□□ 2.04
USP47-205ENST00000525257 THPOP40225 353 aa27.79■■■□□ 2.04
USP47-205ENST00000525257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.79■■■□□ 2.04
USP47-205ENST00000525257 FCHSD1Q86WN1 690 aa27.79■■■□□ 2.04
USP47-205ENST00000525257 PIGSQ96S52 555 aa27.79■■■□□ 2.04
USP47-205ENST00000525257 C16orf70Q9BSU1 422 aa27.79■■■□□ 2.04
USP47-205ENST00000525257 BAZ2BQ9UIF8 2168 aaKnown RBP27.78■■■□□ 2.04
USP47-205ENST00000525257 GCOM1H8Y6P7 765 aaPredicted RBP27.78■■■□□ 2.04
USP47-205ENST00000525257 POLR2MP0CAP2 368 aa27.78■■■□□ 2.04
USP47-205ENST00000525257 SERINC5Q86VE9 423 aa27.78■■■□□ 2.04
USP47-205ENST00000525257 SAMD3Q8N6K7 520 aa27.78■■■□□ 2.04
USP47-205ENST00000525257 MLXIPQ9HAP2 919 aa27.78■■■□□ 2.04
USP47-205ENST00000525257 MICAL3Q7RTP6 2002 aa27.78■■■□□ 2.04
USP47-205ENST00000525257 EMSYQ7Z589 1322 aa27.77■■■□□ 2.04
USP47-205ENST00000525257 GRM4Q14833 912 aa27.77■■■□□ 2.04
USP47-205ENST00000525257 DBF4BQ8NFT6 615 aa27.77■■■□□ 2.04
USP47-205ENST00000525257 EXOC6Q8TAG9 804 aa27.77■■■□□ 2.04
USP47-205ENST00000525257 EPHX3Q9H6B9 360 aa27.77■■■□□ 2.04
USP47-205ENST00000525257 C17orf102A2RUQ5 167 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 RSPH10B2B2RC85 870 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 RSPH10BP0C881 870 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 TGFB3P10600 412 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 TRDNQ13061 729 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 MYOCDQ8IZQ8 938 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 ATP6V0A1Q93050 837 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 BCAS3Q9H6U6 928 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 RIOX1Q9H6W3 641 aa27.76■■■□□ 2.03
USP47-205ENST00000525257 AMHP03971 560 aa27.75■■■□□ 2.03
USP47-205ENST00000525257 C17orf80Q9BSJ5 609 aa27.75■■■□□ 2.03
USP47-205ENST00000525257 SENP2Q9HC62 589 aa27.75■■■□□ 2.03
USP47-205ENST00000525257 INSL6Q9Y581 213 aa27.75■■■□□ 2.03
USP47-205ENST00000525257 H3BRB1 525 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 IFIT3O14879 490 aaKnown RBP27.74■■■□□ 2.03
USP47-205ENST00000525257 LGALS2P05162 132 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 SMIM10L2AP0DMW4 78 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 SMIM10L2BP0DMW5 78 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 PLA2G5P39877 138 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 TRAF1Q13077 416 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 TUT1Q9H6E5 874 aaKnown RBP27.74■■■□□ 2.03
USP47-205ENST00000525257 DOCK5Q9H7D0 1870 aa27.74■■■□□ 2.03
USP47-205ENST00000525257 CYTH3O43739 400 aa27.73■■■□□ 2.03
USP47-205ENST00000525257 MKRN4PQ13434 485 aaPredicted RBP27.73■■■□□ 2.03
USP47-205ENST00000525257 FBXO22Q8NEZ5 403 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms