RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DSG1Q02413 1049 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 ICA1Q05084 483 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 BLMHQ13867 455 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 PTPN14Q15678 1187 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 DDB1Q16531 1140 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 KIAA0753Q2KHM9 967 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 GNPTABQ3T906 1256 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 RPS26P11Q5JNZ5 115 aaPredicted RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 ANKRD45Q5TZF3 282 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 CCDC30Q5VVM6 783 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 DSTYKQ6XUX3 929 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 OVCH2Q7RTZ1 564 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 MILR1Q7Z6M3 343 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 NLRP13Q86W25 1043 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 NRSN1Q8IZ57 195 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 KRT78Q8N1N4 520 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 NXPE1Q8N323 547 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 VWA5B2Q8N398 1253 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 MAGEB10Q96LZ2 347 aaPredicted RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 CNTNAP3BQ96NU0 1288 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 ASB2Q96Q27 587 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 PPP1R16BQ96T49 567 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 TREX2Q9BQ50 279 aaPredicted RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 CNTNAP3Q9BZ76 1288 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 TMEM60Q9H2L4 133 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 EMC7Q9NPA0 242 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 UBN1Q9NPG3 1134 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 ITM2CQ9NQX7 267 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 DISC1Q9NRI5 854 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 NSMCE4AQ9NXX6 385 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 ZNF214Q9UL59 606 aaPredicted RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 SAMM50Q9Y512 469 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 PRR36Q9H6K5 1346 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 SENP3-EIF4A1A0A087X0R7 540 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 FSD2A1L4K1 749 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 KLHL33A6NCF5 533 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 TNFRSF10CO14798 259 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 XPOTO43592 962 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 DKC1O60832 514 aaKnown RBP eCLIP5.16□□□□□ -1.58
CD44-213ENST00000525209 XYLBO75191 536 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 EGFRP00533 1210 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 CYP2E1P05181 493 aaPredicted RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 RHOQP17081 205 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 GRNP28799 593 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 LSSP48449 732 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 PRIM2P49643 509 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 NAP1L1P55209 391 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 FAAP100Q0VG06 881 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 SLC14A2Q15849 920 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 MEA1Q16626 185 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 UVSSAQ2YD98 709 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 RNFT1Q5M7Z0 435 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 MFSD4BQ5TF39 518 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 NUGGCQ68CJ6 796 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 DARS2Q6PI48 645 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 ENOSF1Q7L5Y1 443 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 RASGRP2Q7LDG7 609 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 TEX11Q8IYF3 940 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 ZNF513Q8N8E2 541 aaPredicted RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 DIS3LQ8TF46 1054 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 DIO2Q92813 273 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 GAL3ST3Q96A11 431 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 KIAA1191Q96A73 305 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 ARL8AQ96BM9 186 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 KLRG1Q96E93 195 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 YTHDC1Q96MU7 727 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 NT5C1BQ96P26 610 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 APOL5Q9BWW9 433 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 COL25A1Q9BXS0 654 aaPredicted RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 GSX2Q9BZM3 304 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 BHMT2Q9H2M3 363 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 TRIT1Q9H3H1 467 aaKnown RBP5.16□□□□□ -1.58
CD44-213ENST00000525209 BRD9Q9H8M2 597 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 WASH6PQ9NQA3 447 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 PDRG1Q9NUG6 133 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 C14orf119Q9NWQ9 140 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 DCAF16Q9NXF7 216 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 GGA3Q9NZ52 723 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 CEP72Q9P209 647 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 KANSL3Q9P2N6 904 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 RABL2BQ9UNT1 228 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 HDAC5Q9UQL6 1122 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 SMARCA2P51531 1590 aa5.16□□□□□ -1.58
CD44-213ENST00000525209 MYO15BQ96JP2 1530 aa5.15□□□□□ -1.58
CD44-213ENST00000525209 ANKRD34BA5PLL1 514 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 FAM181BA6NEQ2 426 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.59
CD44-213ENST00000525209 FAM227AF5H4B4 570 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 MEN1O00255 615 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 CBX4O00257 560 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 TMEM127O75204 238 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 TUSC2O75896 110 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 DNTTP04053 509 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 CSTBP04080 98 aaKnown RBP5.15□□□□□ -1.59
CD44-213ENST00000525209 ITGAVP06756 1048 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 MUTP22033 750 aa5.15□□□□□ -1.59
CD44-213ENST00000525209 ITGA6P23229 1130 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms