RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 CASKIN2Q8WXE0 1202 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 KRT12Q99456 494 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 PAGR1Q9BTK6 254 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 BARHL2Q9NY43 387 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 ARPP21Q9UBL0 812 aaPredicted RBP20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 MTMR7Q9Y216 660 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 LAMB2P55268 1798 aa20.1■□□□□ 0.81
PCDHB18P-201ENST00000524813 CASZ1Q86V15 1759 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 NTSR2O95665 410 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 SEC24CP53992 1094 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 TDRD12Q587J7 1177 aaKnown RBP20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 HGSNATQ68CP4 663 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 ATP6V1G3Q96LB4 118 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 ATP8A2Q9NTI2 1148 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 MYH1P12882 1939 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 SSU72P8A0A1W2PR75 194 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 CYTH3O43739 400 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 PALMO75781 387 aa20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 SETQ01105 290 aaPredicted RBP20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 YTHDF3Q7Z739 585 aaKnown RBP20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 MMTAG2Q9BU76 263 aaKnown RBP20.09■□□□□ 0.81
PCDHB18P-201ENST00000524813 FTCDO95954 541 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 GNAQP50148 359 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 UBE4AQ14139 1066 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 TRADDQ15628 312 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 RNF187Q5TA31 235 aaPredicted RBP20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 NLRP14Q86W24 1093 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 DGKHQ86XP1 1220 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 CCT8L2Q96SF2 557 aa20.08■□□□□ 0.81
PCDHB18P-201ENST00000524813 CLSTN1O94985 981 aa20.08■□□□□ 0.8
PCDHB18P-201ENST00000524813 FGFR1OPO95684 399 aaKnown RBP20.08■□□□□ 0.8
PCDHB18P-201ENST00000524813 MDH1P40925 334 aaKnown RBP20.08■□□□□ 0.8
PCDHB18P-201ENST00000524813 SBK1Q52WX2 424 aa20.08■□□□□ 0.8
PCDHB18P-201ENST00000524813 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.8
PCDHB18P-201ENST00000524813 CALML4Q96GE6 196 aa20.08■□□□□ 0.8
PCDHB18P-201ENST00000524813 ABCB11O95342 1321 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 MAP2K2P36507 400 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 RNASE9P60153 205 aaKnown RBP20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 SV2BQ7L1I2 683 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 MYCBPAPQ8TBZ2 947 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 WHAMMQ8TF30 809 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 TANGO6Q9C0B7 1094 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 NLRC4Q9NPP4 1024 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 MYMKA6NI61 221 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 HMGB1P1B2RPK0 211 aaPredicted RBP20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 RBAK-RBAKDNI3L0D1 243 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 TMED8Q6PL24 325 aaPredicted RBP20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 CLEC4GQ6UXB4 293 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 DYMQ7RTS9 669 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 MAATS1Q7Z4T9 603 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 ARHGEF1Q92888 912 aaKnown RBP20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 MCM9Q9NXL9 1143 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 NARFQ9UHQ1 456 aa20.07■□□□□ 0.8
PCDHB18P-201ENST00000524813 GRID2IPA4D2P6 1211 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 USP17L8P0C7I0 530 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 KCNMA1Q12791 1236 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 ITGB3BPQ13352 177 aaPredicted RBP20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 PACSIN2Q9UNF0 486 aaPredicted RBP20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 PLAAQ9Y263 795 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 LAMB1P07942 1786 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 NONOQ15233 471 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 CDC37Q16543 378 aaPredicted RBP20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 SLC9C1Q4G0N8 1177 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 CEP85LQ5SZL2 805 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 UNC13DQ70J99 1090 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 C1orf131Q8NDD1 294 aaKnown RBP20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 EDEM3Q9BZQ6 932 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 UBR3Q6ZT12 1888 aa20.06■□□□□ 0.8
PCDHB18P-201ENST00000524813 E7EVH7 732 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 DDR1Q08345 913 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 NAB2Q15742 525 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 SFMBT2Q5VUG0 894 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 KRT25Q7Z3Z0 450 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 GUF1Q8N442 669 aaKnown RBP20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 BLOC1S4Q9NUP1 217 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 USP17L3A6NCW0 530 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 USP17L4A6NCW7 530 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 RAD51CO43502 376 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 TLR2O60603 784 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 FAM107AO95990 144 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 KLRC1P26715 233 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 RXRBP28702 533 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 HPDP32754 393 aaPredicted RBP20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 NAPAP54920 295 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 EHHADHQ08426 723 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 IFT88Q13099 833 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 ERFEQ4G0M1 354 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 MEI1Q5TIA1 1274 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 USP17L1Q7RTZ2 530 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 ANKS1AQ92625 1134 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 INPP4AQ96PE3 977 aaPredicted RBP20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 JPH2Q9BR39 696 aaPredicted RBP20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 CXorf56Q9H5V9 222 aa20.05■□□□□ 0.8
PCDHB18P-201ENST00000524813 PVALEFA0A1B0GWK0 134 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms