RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 FERD3LQ96RJ6 166 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 HNRNPABQ99729 332 aaKnown RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 STARD7Q9NQZ5 370 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 CTAGE15A4D2H0 777 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 AGR2O95994 175 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 IFNA14P01570 189 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 CTAGE8P0CG41 777 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 PTGS1P23219 599 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 TKTP29401 623 aaKnown RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 HOXD11P31277 338 aaPredicted RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 SKIV2L2P42285 1042 aaKnown RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 PEX5P50542 639 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 BEND5Q7L4P6 421 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 CTAGE4Q8IX94 777 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 OR8H2Q8N162 312 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 ARL5BQ96KC2 179 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 CNPY3Q9BT09 278 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 ESYT2A0FGR8 921 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 BHMG1C9JSJ3 638 aaPredicted RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 RTCAO00442 366 aaKnown RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 CAPN9O14815 690 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 PCP11498 1178 aaKnown RBP7.5□□□□□ -1.21
LIN7C-202ENST00000524596 ALDH1B1P30837 517 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 RAB14P61106 215 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 IFT20Q8IY31 132 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 KIRREL3Q8IZU9 778 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 RABGGTAQ92696 567 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 SLC8A2Q9UPR5 921 aa7.5□□□□□ -1.21
LIN7C-202ENST00000524596 CCDC163A0A0D9SF12 145 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 C9IYK1 514 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 M0QX08 132 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 DKC1O60832 514 aaKnown RBP eCLIP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SLC4A1P02730 911 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 NPR1P16066 1061 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ATP4AP20648 1035 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SERPINB6P35237 376 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 RARSP54136 660 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 LONRF2Q1L5Z9 754 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 KRT77Q7Z794 578 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 RNF135Q8IUD6 432 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CROCCP3Q8IVE0 287 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CARNMT1Q8N4J0 409 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CFAP61Q8NHU2 1237 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 HOXC10Q9NYD6 342 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ANGPTL2Q9UKU9 493 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MAGEB16A2A368 324 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 HTR3EA5X5Y0 456 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SPDYE5A6NIY4 337 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ANGPT2O15123 496 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 PENKP01210 267 aaPredicted RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 RAB15P59190 212 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 APOBRQ0VD83 1088 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ADCK1Q86TW2 530 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 AKAP14Q86UN6 197 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 VPS37DQ86XT2 251 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SNX29Q8TEQ0 813 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 EIF2AK1Q9BQI3 630 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ELAC1Q9H777 363 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CCDC177Q9NQR7 707 aaPredicted RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MRPS23Q9Y3D9 190 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CFAP73A6NFT4 308 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ITGAXP20702 1163 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MAGEA10P43363 369 aaPredicted RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 PICALMQ13492 652 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 DHX34Q14147 1143 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 GNA13Q14344 377 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MVPQ14764 893 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 P3H1Q32P28 736 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 PDCD4Q53EL6 469 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MFSD6Q6ZSS7 791 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CABP7Q86V35 215 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ZNF579Q8NAF0 562 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MAGEC3Q8TD91 643 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SNX21Q969T3 373 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CEP44Q9C0F1 390 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 HOMER2Q9NSB8 354 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 TMOD3Q9NYL9 352 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 TMOD2Q9NZR1 351 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 DDX19BQ9UMR2 479 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 ZNF644Q9H582 1327 aaPredicted RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 A0A0B4J203 849 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 TBC1D8O95759 1140 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SLC3A2P08195 630 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 DLATP10515 647 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 MLLT1Q03111 559 aaPredicted RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 CYTH1Q15438 398 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 GLE1Q53GS7 698 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 FIP1L1Q6UN15 594 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 UNC5DQ6UXZ4 953 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 STXBP4Q6ZWJ1 553 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 GALNT7Q86SF2 657 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 PATL1Q86TB9 770 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 SCYL3Q8IZE3 742 aa7.49□□□□□ -1.21
LIN7C-202ENST00000524596 LRRC47Q8N1G4 583 aaKnown RBP7.49□□□□□ -1.21
LIN7C-202ENST00000524596 EPS8L3Q8TE67 593 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms