RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 HAS3O00219 553 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 SORBS3O60504 671 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 PARNO95453 639 aaKnown RBP18.85■□□□□ 0.61
HIF3A-208ENST00000524533 GGPS1O95749 300 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 CKBP12277 381 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 HOXD8P13378 290 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-208ENST00000524533 UBA1P22314 1058 aaKnown RBP18.85■□□□□ 0.61
HIF3A-208ENST00000524533 MRPS5P82675 430 aaKnown RBP18.85■□□□□ 0.61
HIF3A-208ENST00000524533 MYSM1Q5VVJ2 828 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 CNKSR3Q6P9H4 555 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 VSIG10LQ86VR7 867 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 FCHSD1Q86WN1 690 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 SPATA33Q96N06 139 aa18.85■□□□□ 0.61
HIF3A-208ENST00000524533 PNMA6FA0A0J9YX94 578 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 TNFRSF10AO00220 468 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 CYTH3O43739 400 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
HIF3A-208ENST00000524533 WDR5P61964 334 aaKnown RBP18.84■□□□□ 0.61
HIF3A-208ENST00000524533 TROAPQ12815 778 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 PTK7Q13308 1070 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 HSDL1Q3SXM5 330 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
HIF3A-208ENST00000524533 CATIPQ7Z7H3 387 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 IL27Q8NEV9 243 aa18.84■□□□□ 0.61
HIF3A-208ENST00000524533 RFXAPO00287 272 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 SGSM2O43147 1006 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 TLL1O43897 1013 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 PPFIA4O75335 1185 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 ARHGEF15O94989 841 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 CXCL10P02778 98 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 TAP1Q03518 808 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 GPNMBQ14956 572 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 ADAMTS19Q8TE59 1207 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 ARNTL2Q8WYA1 636 aa18.83■□□□□ 0.6
HIF3A-208ENST00000524533 ZFP91Q96JP5 570 aaPredicted RBP18.83■□□□□ 0.6
HIF3A-208ENST00000524533 BAZ2BQ9UIF8 2168 aaKnown RBP18.83■□□□□ 0.6
HIF3A-208ENST00000524533 EPOPA6NHQ4 379 aa18.82■□□□□ 0.6
HIF3A-208ENST00000524533 NBNO60934 754 aa18.82■□□□□ 0.6
HIF3A-208ENST00000524533 TGFB3P10600 412 aa18.82■□□□□ 0.6
HIF3A-208ENST00000524533 SP2Q02086 613 aa18.82■□□□□ 0.6
HIF3A-208ENST00000524533 TRIM71Q2Q1W2 868 aaKnown RBP18.82■□□□□ 0.6
HIF3A-208ENST00000524533 GPKOWQ92917 476 aaPredicted RBP eCLIP18.82■□□□□ 0.6
HIF3A-208ENST00000524533 MLXIPQ9HAP2 919 aa18.82■□□□□ 0.6
HIF3A-208ENST00000524533 MTCH2Q9Y6C9 303 aa18.82■□□□□ 0.6
HIF3A-208ENST00000524533 FRMPD4Q14CM0 1322 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 POU3F3P20264 500 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-208ENST00000524533 ANTXR2P58335 489 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-208ENST00000524533 DEFB103AP81534 67 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 ZNF200P98182 395 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-208ENST00000524533 SKIV2LQ15477 1246 aaKnown RBP18.81■□□□□ 0.6
HIF3A-208ENST00000524533 GNPTABQ3T906 1256 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 TMCO2Q7Z6W1 182 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-208ENST00000524533 MB21D2Q8IYB1 491 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-208ENST00000524533 PIBF1Q8WXW3 757 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 WNT8BQ93098 351 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 ZBED2Q9BTP6 218 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 DOCK5Q9H7D0 1870 aa18.81■□□□□ 0.6
HIF3A-208ENST00000524533 MUC3AQ02505 3323 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 ABHD14A-ACY1A0A1B0GW23 586 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 EFCAB14O75071 495 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 TCTN1Q2MV58 587 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 ZNF618Q5T7W0 954 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 TRAF7Q6Q0C0 670 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 CTCFLQ8NI51 663 aaPredicted RBP18.8■□□□□ 0.6
HIF3A-208ENST00000524533 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 C16orf70Q9BSU1 422 aa18.8■□□□□ 0.6
HIF3A-208ENST00000524533 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
HIF3A-208ENST00000524533 LCHNA4D1U4 455 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 NOP56O00567 594 aaKnown RBP18.79■□□□□ 0.6
HIF3A-208ENST00000524533 STAM2O75886 525 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 DDAH1O94760 285 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 IKBKEQ14164 716 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 HIC1Q14526 733 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 SERINC5Q86VE9 423 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 ZNF654Q8IZM8 581 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 INPP4AQ96PE3 977 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-208ENST00000524533 UHRF1Q96T88 793 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-208ENST00000524533 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
HIF3A-208ENST00000524533 PRRC2BQ5JSZ5 2229 aaKnown RBP18.78■□□□□ 0.6
HIF3A-208ENST00000524533 EMSYQ7Z589 1322 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 C17orf102A2RUQ5 167 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 H3BRB1 525 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 LGALS2P05162 132 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 KIF5BP33176 963 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 MRPS9P82933 396 aaKnown RBP18.78■□□□□ 0.6
HIF3A-208ENST00000524533 MBTPS1Q14703 1052 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 AAK1Q2M2I8 961 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 KRT40Q6A162 431 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 SPRED2Q7Z698 418 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 RRP36Q96EU6 259 aaKnown RBP18.78■□□□□ 0.6
HIF3A-208ENST00000524533 MAP3K14Q99558 947 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 MYL10Q9BUA6 226 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 TUT1Q9H6E5 874 aaKnown RBP18.78■□□□□ 0.6
HIF3A-208ENST00000524533 LY9Q9HBG7 655 aa18.78■□□□□ 0.6
HIF3A-208ENST00000524533 SEC63Q9UGP8 760 aaKnown RBP18.78■□□□□ 0.6
HIF3A-208ENST00000524533 SIP14410 1827 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms