RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 IGDCC4Q8TDY8 1250 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 PIBF1Q8WXW3 757 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 SLC9A7Q96T83 725 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 MLXIPQ9HAP2 919 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 PCDHA11Q9Y5I1 949 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 SLC12A7Q9Y666 1083 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 TAF6LQ9Y6J9 622 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 UNC80Q8N2C7 3258 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 CDH23Q9H251 3354 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 KIF28PB7ZC32 967 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 SLC27A2O14975 620 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 CYTH3O43739 400 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 PPFIA4O75335 1185 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 BAIAP3O94812 1187 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 SELPP16109 830 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 NEDD9Q14511 834 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 KIAA0753Q2KHM9 967 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 AAK1Q2M2I8 961 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 CREB3L3Q68CJ9 461 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 IL27Q8NEV9 243 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 ADAMTS19Q8TE59 1207 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 ALG1Q9BT22 464 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 NKX2-4Q9H2Z4 354 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 GTF2IRD1Q9UHL9 959 aa10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 ARIH1Q9Y4X5 557 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-240ENST00000523912 FIBPO43427 364 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 EFCAB14O75071 495 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 HOXD8P13378 290 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 LIFRP42702 1097 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 RBL2Q08999 1139 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 KRT32Q14532 448 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 SLC35G1Q2M3R5 365 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 GDF6Q6KF10 455 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 METTL7BQ6UX53 244 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 LRRC8DQ7L1W4 858 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 NLRX1Q86UT6 975 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 IL31RAQ8NI17 732 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 PHOSPHO2Q8TCD6 241 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 KAT2BQ92831 832 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 CDHR1Q96JP9 859 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 UHRF1Q96T88 793 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 MYL10Q9BUA6 226 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 HDAC6Q9UBN7 1215 aa10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 ZNF215Q9UL58 517 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-240ENST00000523912 FRMPD4Q14CM0 1322 aa10.21□□□□□ -0.78
CTNNA1-240ENST00000523912 C17orf102A2RUQ5 167 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 SPDYE3A6NKU9 549 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 PIK3CDO00329 1044 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 SORBS3O60504 671 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 CDC45O75419 566 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 RGS20O76081 388 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 RABGGTBP53611 331 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 PTK7Q13308 1070 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 PCNX4Q63HM2 1172 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 EMSYQ7Z589 1322 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 MICU3Q86XE3 530 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 GIMAP8Q8ND71 665 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 PPP1R13LQ8WUF5 828 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 INPP4AQ96PE3 977 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 C1QTNF1Q9BXJ1 281 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 PSTPIP2Q9H939 334 aa10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 YBX2Q9Y2T7 364 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-240ENST00000523912 MYH6P13533 1939 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 HAS3O00219 553 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 PLEKHA8P1O95397 391 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 GNAT1P11488 350 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 IGFBP4P22692 258 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 ICAM3P32942 547 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 FGD1P98174 961 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 HSDL1Q3SXM5 330 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 CNKSR3Q6P9H4 555 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 TMTC3Q6ZXV5 915 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 HEATR3Q7Z4Q2 680 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 SGMS1Q86VZ5 419 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 HERC6Q8IVU3 1022 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 TEX2Q8IWB9 1127 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 FANCBQ8NB91 859 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 USP26Q9BXU7 913 aa10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 BAZ2BQ9UIF8 2168 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-240ENST00000523912 ABHD14A-ACY1A0A1B0GW23 586 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 SPATA31C2B4DYI2 1134 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 H3BRB1 525 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 GTPBP6O43824 516 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 CAND2O75155 1236 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 LGALS2P05162 132 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 CA3P07451 260 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 HMGB1P09429 215 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 CKBP12277 381 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 BMP1P13497 986 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 RXRAP19793 462 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms