RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RGS20O76081 388 aa26.52■■□□□ 1.84
PVT1-218ENST00000523328 SDSP20132 328 aa26.52■■□□□ 1.84
PVT1-218ENST00000523328 HSD17B4P51659 736 aa26.52■■□□□ 1.84
PVT1-218ENST00000523328 HIC1Q14526 733 aa26.52■■□□□ 1.84
PVT1-218ENST00000523328 DHX37Q8IY37 1157 aaKnown RBP26.52■■□□□ 1.84
PVT1-218ENST00000523328 GPR37L1O60883 481 aa26.51■■□□□ 1.83
PVT1-218ENST00000523328 CFBP00751 764 aa26.51■■□□□ 1.83
PVT1-218ENST00000523328 PARP1P09874 1014 aaKnown RBP26.51■■□□□ 1.83
PVT1-218ENST00000523328 GHRHRQ02643 423 aa26.51■■□□□ 1.83
PVT1-218ENST00000523328 MKRN4PQ13434 485 aaPredicted RBP26.51■■□□□ 1.83
PVT1-218ENST00000523328 FAM117BQ6P1L5 589 aa26.51■■□□□ 1.83
PVT1-218ENST00000523328 UBE2ZQ9H832 354 aaPredicted RBP26.51■■□□□ 1.83
PVT1-218ENST00000523328 VAT1LQ9HCJ6 419 aa26.51■■□□□ 1.83
PVT1-218ENST00000523328 HCN4Q9Y3Q4 1203 aa26.51■■□□□ 1.83
PVT1-218ENST00000523328 DHX16O60231 1041 aaKnown RBP26.5■■□□□ 1.83
PVT1-218ENST00000523328 LGR5O75473 907 aa26.5■■□□□ 1.83
PVT1-218ENST00000523328 RRP1P56182 461 aaKnown RBP26.5■■□□□ 1.83
PVT1-218ENST00000523328 MYSM1Q5VVJ2 828 aa26.5■■□□□ 1.83
PVT1-218ENST00000523328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.5■■□□□ 1.83
PVT1-218ENST00000523328 CRBNQ96SW2 442 aa26.5■■□□□ 1.83
PVT1-218ENST00000523328 LNPKQ9C0E8 428 aa26.5■■□□□ 1.83
PVT1-218ENST00000523328 ZSWIM5Q9P217 1185 aa26.5■■□□□ 1.83
PVT1-218ENST00000523328 PPFIA4O75335 1185 aa26.49■■□□□ 1.83
PVT1-218ENST00000523328 PDCD2LQ9BRP1 358 aa26.49■■□□□ 1.83
PVT1-218ENST00000523328 PI4K2BG5E9Z4 385 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 HSDL1Q3SXM5 330 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 LEXMQ3ZCV2 418 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 CELF3Q5SZQ8 465 aaKnown RBP26.48■■□□□ 1.83
PVT1-218ENST00000523328 STAG2Q8N3U4 1231 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 DBF4BQ8NFT6 615 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 C17orf80Q9BSJ5 609 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 AMNQ9BXJ7 453 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 INSL6Q9Y581 213 aa26.48■■□□□ 1.83
PVT1-218ENST00000523328 EMSYQ7Z589 1322 aa26.47■■□□□ 1.83
PVT1-218ENST00000523328 FAM86C2PA6NEL3 165 aa26.47■■□□□ 1.83
PVT1-218ENST00000523328 PPP1R11O60927 126 aaPredicted RBP26.47■■□□□ 1.83
PVT1-218ENST00000523328 HTRA4P83105 476 aaPredicted RBP26.47■■□□□ 1.83
PVT1-218ENST00000523328 STOX1Q6ZVD7 989 aa26.47■■□□□ 1.83
PVT1-218ENST00000523328 SERINC5Q86VE9 423 aa26.47■■□□□ 1.83
PVT1-218ENST00000523328 MTMR8Q96EF0 704 aa26.47■■□□□ 1.83
PVT1-218ENST00000523328 SORBS3O60504 671 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 MYCLP12524 364 aaPredicted RBP26.46■■□□□ 1.83
PVT1-218ENST00000523328 SP2Q02086 613 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 KCNV1Q6PIU1 500 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 CWC27Q6UX04 472 aaKnown RBP26.46■■□□□ 1.83
PVT1-218ENST00000523328 VSIG10LQ86VR7 867 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 FBXO22Q8NEZ5 403 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.46■■□□□ 1.83
PVT1-218ENST00000523328 SP7Q8TDD2 431 aaPredicted RBP26.46■■□□□ 1.83
PVT1-218ENST00000523328 SPATA33Q96N06 139 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 C16orf70Q9BSU1 422 aa26.46■■□□□ 1.83
PVT1-218ENST00000523328 MAP3K20Q9NYL2 800 aaKnown RBP26.46■■□□□ 1.83
PVT1-218ENST00000523328 GGPS1O95749 300 aa26.45■■□□□ 1.82
PVT1-218ENST00000523328 PGM5Q15124 567 aa26.45■■□□□ 1.82
PVT1-218ENST00000523328 FAM178BQ8IXR5 827 aa26.45■■□□□ 1.82
PVT1-218ENST00000523328 MYOCDQ8IZQ8 938 aa26.45■■□□□ 1.82
PVT1-218ENST00000523328 IL31RAQ8NI17 732 aa26.45■■□□□ 1.82
PVT1-218ENST00000523328 NLRC5Q86WI3 1866 aa26.45■■□□□ 1.82
PVT1-218ENST00000523328 RSPH10B2B2RC85 870 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 AMHP03971 560 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 RSPH10BP0C881 870 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 UBA1P22314 1058 aaKnown RBP26.44■■□□□ 1.82
PVT1-218ENST00000523328 KCNA5P22460 613 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 HOXC8P31273 242 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 THPOP40225 353 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 PLEKHG4Q58EX7 1191 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 DSCC1Q9BVC3 393 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 BAZ2BQ9UIF8 2168 aaKnown RBP26.44■■□□□ 1.82
PVT1-218ENST00000523328 MUC6Q6W4X9 2439 aa26.44■■□□□ 1.82
PVT1-218ENST00000523328 ZBTB5O15062 677 aa26.43■■□□□ 1.82
PVT1-218ENST00000523328 HOXA13P31271 388 aaPredicted RBP26.43■■□□□ 1.82
PVT1-218ENST00000523328 IMMTQ16891 758 aaKnown RBP26.43■■□□□ 1.82
PVT1-218ENST00000523328 PLEKHM2Q8IWE5 1019 aa26.43■■□□□ 1.82
PVT1-218ENST00000523328 SAMD3Q8N6K7 520 aa26.43■■□□□ 1.82
PVT1-218ENST00000523328 GPKOWQ92917 476 aaPredicted RBP eCLIP26.43■■□□□ 1.82
PVT1-218ENST00000523328 KRT23Q9C075 422 aa26.43■■□□□ 1.82
PVT1-218ENST00000523328 OSBPL3Q9H4L5 887 aa26.43■■□□□ 1.82
PVT1-218ENST00000523328 PCDHA1Q9Y5I3 950 aa26.43■■□□□ 1.82
PVT1-218ENST00000523328 KLRF2D3W0D1 207 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 TGFB3P10600 412 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 IL9P15248 144 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 SMC5Q8IY18 1101 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 GJD3Q8N144 294 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 ATP6V0A1Q93050 837 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 MRPL38Q96DV4 380 aaKnown RBP26.42■■□□□ 1.82
PVT1-218ENST00000523328 UBAC1Q9BSL1 405 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 MAD2L2Q9UI95 211 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 DOCK5Q9H7D0 1870 aa26.42■■□□□ 1.82
PVT1-218ENST00000523328 C17orf102A2RUQ5 167 aa26.41■■□□□ 1.82
PVT1-218ENST00000523328 SEC23AQ15436 765 aa26.41■■□□□ 1.82
PVT1-218ENST00000523328 EPC2Q52LR7 807 aa26.41■■□□□ 1.82
PVT1-218ENST00000523328 IFIT1BQ5T764 474 aaKnown RBP26.41■■□□□ 1.82
PVT1-218ENST00000523328 ZFP91Q96JP5 570 aaPredicted RBP26.41■■□□□ 1.82
PVT1-218ENST00000523328 OSBPL7Q9BZF2 842 aa26.41■■□□□ 1.82
PVT1-218ENST00000523328 DIAPH3Q9NSV4 1193 aa26.41■■□□□ 1.82
PVT1-218ENST00000523328 COL4A6Q14031 1691 aa26.41■■□□□ 1.82
PVT1-218ENST00000523328 H3BRB1 525 aa26.4■■□□□ 1.82
PVT1-218ENST00000523328 SLC35G1Q2M3R5 365 aa26.4■■□□□ 1.82
PVT1-218ENST00000523328 PTCRAQ6ISU1 281 aaPredicted RBP26.4■■□□□ 1.82
PVT1-218ENST00000523328 TUT1Q9H6E5 874 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms