RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 PCNX4Q63HM2 1172 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 NCAPH2Q6IBW4 605 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 RGMBQ6NW40 437 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 PDXDC2PQ6P474 469 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 SLFN12Q8IYM2 578 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 CEP57L1Q8IYX8 460 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 RNF214Q8ND24 703 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 SMC1BQ8NDV3 1235 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 SNX29Q8TEQ0 813 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 SMCR8Q8TEV9 937 aaPredicted RBP7.57□□□□□ -1.2
PVT1-217ENST00000523190 LRRC15Q8TF66 581 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 STAMQ92783 540 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 RMDN3Q96TC7 470 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 NUDT12Q9BQG2 462 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 MXRA8Q9BRK3 442 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 MMTAG2Q9BU76 263 aaKnown RBP7.57□□□□□ -1.2
PVT1-217ENST00000523190 RAB34Q9BZG1 259 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 TSPYL2Q9H2G4 693 aaPredicted RBP7.57□□□□□ -1.2
PVT1-217ENST00000523190 GRPEL1Q9HAV7 217 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 CYP39A1Q9NYL5 469 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 PKD2L1Q9P0L9 805 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 KIAA1468Q9P260 1216 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 FBXO40Q9UH90 709 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 PCDHA12Q9UN75 941 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 SLC45A1Q9Y2W3 748 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 UBIAD1Q9Y5Z9 338 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 TLL2Q9Y6L7 1015 aa7.57□□□□□ -1.2
PVT1-217ENST00000523190 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 MEIS1O00470 390 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PITPNM1O00562 1244 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 SLC25A27O95847 323 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 SLC10A3P09131 477 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 SLFN14P0C7P3 912 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ITGB5P18084 799 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 CCND2P30279 289 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 COPB2P35606 906 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PSEN1P49768 467 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ERVK-24P63145 666 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 MDM2Q00987 491 aaPredicted RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 SETQ01105 290 aaPredicted RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 CNTN2Q02246 1040 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 SPIRE1Q08AE8 756 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 GRB10Q13322 594 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PDIA5Q14554 519 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 STX1AQ16623 288 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ANO6Q4KMQ2 910 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 NAALADL2Q58DX5 795 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 WDR78Q5VTH9 848 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 LRCH2Q5VUJ6 765 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 KRT79Q5XKE5 535 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ISM2Q6H9L7 571 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 C11orf57Q6ZUT1 292 aaPredicted RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 SAPCD2Q86UD0 394 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ELOA2Q8IYF1 753 aaPredicted RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 ANKRD35Q8N283 1001 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ANKRD13CQ8N6S4 541 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 IQUBQ8NA54 791 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 SLC5A5Q92911 643 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 CALML4Q96GE6 196 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PAGE5Q96GU1 130 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 CDK5RAP3Q96JB5 506 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 FAM20AQ96MK3 541 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PNMA5Q96PV4 448 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PARK7Q99497 189 aaKnown RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 PTPN18Q99952 460 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PYM1Q9BRP8 204 aaKnown RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 ZNF577Q9BSK1 485 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 WDR11Q9BZH6 1224 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 MAF1Q9H063 256 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PORCNQ9H237 461 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 EFCC1Q9HA90 598 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 USP25Q9UHP3 1055 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 HOOK1Q9UJC3 728 aaKnown RBP7.56□□□□□ -1.2
PVT1-217ENST00000523190 TUBE1Q9UJT0 475 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 PCDHA5Q9Y5H7 936 aa7.56□□□□□ -1.2
PVT1-217ENST00000523190 ASTN1O14525 1302 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 PFASO15067 1338 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 KDM3AQ9Y4C1 1321 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 POTEB3A0JP26 581 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 SOWAHBA6NEL2 793 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 MANSC4A6NHS7 340 aaPredicted RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 POTEB2H3BUK9 544 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 DDX39AO00148 427 aaKnown RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 EML1O00423 815 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 CHMP2AO43633 222 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 GAS7O60861 476 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 MED24O75448 989 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 PSMD10O75832 226 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 NR3C2P08235 984 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 CCT6AP40227 531 aaKnown RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 MRE11P49959 708 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 ALDH5A1P51649 535 aaPredicted RBP7.55□□□□□ -1.2
PVT1-217ENST00000523190 NLRP12P59046 1061 aa7.55□□□□□ -1.2
PVT1-217ENST00000523190 MTMR1Q13613 665 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms