RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 HOXA7P31268 230 aaPredicted RBP15.08■□□□□ 0
SYNPO-205ENST00000522122 RASA3Q14644 834 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 MTF1Q14872 753 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 VPS52Q8N1B4 723 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 UHMK1Q8TAS1 419 aaKnown RBP15.08■□□□□ 0
SYNPO-205ENST00000522122 RAB3IL1Q8TBN0 382 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 CCDC127Q96BQ5 260 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 LIMA1Q9UHB6 759 aaKnown RBP15.08■□□□□ 0
SYNPO-205ENST00000522122 GJA3Q9Y6H8 435 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 TRIM37O94972 964 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 LMNB1P20700 586 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 XKR9Q5GH70 373 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 SMCR8Q8TEV9 937 aaPredicted RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 PIGSQ96S52 555 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 TEKT3Q9BXF9 490 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 NWD1Q149M9 1564 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 hCG_1984214I3L0E3 225 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 KRT19P08727 400 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PLCG1P19174 1290 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 EIF4A3P38919 411 aaKnown RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 RASSF2P50749 326 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 TSNAXIP1Q2TAA8 658 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 ZNF713Q8N859 430 aaPredicted RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 MAP3K14Q99558 947 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 C1orf112Q9NSG2 853 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PNPLA7Q6ZV29 1317 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 TNS3Q68CZ2 1445 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PTPAQ15257 358 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 KRT26Q7Z3Y9 468 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 TESPA1A2RU30 521 aaPredicted RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 USP17L8P0C7I0 530 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 POLD1P28340 1107 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 GUCY1A2P33402 732 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PDE6CP51160 858 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 TRIM28Q13263 835 aaKnown RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 DEPTORQ8TB45 409 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PIGBQ92521 554 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PPP1R12CQ9BZL4 782 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 PSD3Q9NYI0 1048 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
SYNPO-205ENST00000522122 COL15A1P39059 1388 aa15.07■□□□□ 0
SYNPO-205ENST00000522122 A0A087WUV0 522 aaPredicted RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 I3L4J1 428 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 STK10O94804 968 aaKnown RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 TTLL1O95922 423 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 ALAS1P13196 640 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 CXCR5P32302 372 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 DOK7Q18PE1 504 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 ALS2CLQ60I27 953 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 PAXIP1Q6ZW49 1069 aaPredicted RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 ZCCHC17Q9NP64 241 aaKnown RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 GINS2Q9Y248 185 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 PPIP5K2O43314 1243 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 AFPP02771 609 aaKnown RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 CASP1P29466 404 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 PLA2G4AP47712 749 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 TTC19Q6DKK2 380 aaPredicted RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 NDST4Q9H3R1 872 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 TYW1Q9NV66 732 aaKnown RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 RIPOR2Q9Y4F9 1068 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 GSG1L2A8MUP6 293 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 NCAPHQ15003 741 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 ERFEQ4G0M1 354 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 DGKHQ86XP1 1220 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 MAGOHBQ96A72 148 aaKnown RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 HOOK2Q96ED9 719 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 PCDHA13Q9Y5I0 950 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 TARSL2A2RTX5 802 aaKnown RBP15.06■□□□□ 0
SYNPO-205ENST00000522122 PDE6BP35913 854 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 USP14P54578 494 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 DPYDQ12882 1025 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 AOC3Q16853 763 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 USP17L2Q6R6M4 530 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 FAM114A2Q9NRY5 505 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 GDAQ9Y2T3 454 aa15.06■□□□□ 0
SYNPO-205ENST00000522122 DAPK3O43293 454 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 MAGEA9P43362 315 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 RAB20Q9NX57 234 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 PASKQ96RG2 1323 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 THAP12O43422 761 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 TROVE2P10155 538 aaKnown RBP eCLIP15.05■□□□□ 0
SYNPO-205ENST00000522122 SDCCAG8Q86SQ7 713 aaPredicted RBP15.05■□□□□ 0
SYNPO-205ENST00000522122 COA7Q96BR5 231 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 RUNDC3BQ96NL0 473 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 SERPINB13Q9UIV8 391 aa15.05■□□□□ 0
SYNPO-205ENST00000522122 PGRMC1O00264 195 aaKnown RBP15.05■□□□□ -0
SYNPO-205ENST00000522122 MOCS3O95396 460 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 PSMC2P35998 433 aaKnown RBP15.05■□□□□ -0
SYNPO-205ENST00000522122 NT5C2P49902 561 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 LIG4P49917 911 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 YWHAEP62258 255 aaKnown RBP15.05■□□□□ -0
SYNPO-205ENST00000522122 ATP2C1P98194 919 aaPredicted RBP15.05■□□□□ -0
SYNPO-205ENST00000522122 PSMD2Q13200 908 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 HLFQ16534 295 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 ABCB5Q2M3G0 1257 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 CTAGE3PQ8IX95 158 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 VTI1AQ96AJ9 217 aa15.05■□□□□ -0
SYNPO-205ENST00000522122 DAAM1Q9Y4D1 1078 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms