RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 ATP2A2P16615 1042 aaKnown RBP21.3■■□□□ 1
TOP1MT-216ENST00000522121 UBA1P22314 1058 aaKnown RBP21.3■■□□□ 1
TOP1MT-216ENST00000522121 KIAA0753Q2KHM9 967 aa21.3■■□□□ 1
TOP1MT-216ENST00000522121 AFAP1L1Q8TED9 768 aa21.3■■□□□ 1
TOP1MT-216ENST00000522121 VWCEQ96DN2 955 aa21.3■■□□□ 1
TOP1MT-216ENST00000522121 NKX2-4Q9H2Z4 354 aa21.3■■□□□ 1
TOP1MT-216ENST00000522121 HDAC6Q9UBN7 1215 aa21.3■■□□□ 1
TOP1MT-216ENST00000522121 GTF2IRD1Q9UHL9 959 aa21.3■■□□□ 1
TOP1MT-216ENST00000522121 PLEKHA8P1O95397 391 aa21.29■■□□□ 1
TOP1MT-216ENST00000522121 HOXD8P13378 290 aaPredicted RBP21.29■■□□□ 1
TOP1MT-216ENST00000522121 SP2Q02086 613 aa21.29■■□□□ 1
TOP1MT-216ENST00000522121 HSDL1Q3SXM5 330 aa21.29■■□□□ 1
TOP1MT-216ENST00000522121 SYNE3Q6ZMZ3 975 aa21.29■■□□□ 1
TOP1MT-216ENST00000522121 SRBD1Q8N5C6 995 aaKnown RBP21.29■■□□□ 1
TOP1MT-216ENST00000522121 ZFP91Q96JP5 570 aaPredicted RBP21.29■■□□□ 1
TOP1MT-216ENST00000522121 PCDHA11Q9Y5I1 949 aa21.29■■□□□ 1
TOP1MT-216ENST00000522121 FRMPD4Q14CM0 1322 aa21.29■■□□□ 1
TOP1MT-216ENST00000522121 HAS3O00219 553 aa21.28■■□□□ 1
TOP1MT-216ENST00000522121 PARNO95453 639 aaKnown RBP21.28■■□□□ 1
TOP1MT-216ENST00000522121 RXRAP19793 462 aa21.28■■□□□ 1
TOP1MT-216ENST00000522121 INPP4AQ96PE3 977 aaPredicted RBP21.28■■□□□ 1
TOP1MT-216ENST00000522121 YBX2Q9Y2T7 364 aaKnown RBP21.28■■□□□ 1
TOP1MT-216ENST00000522121 PIK3CDO00329 1044 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 NOP56O00567 594 aaKnown RBP21.27■■□□□ 1
TOP1MT-216ENST00000522121 SELPP16109 830 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 RABGGTBP53611 331 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 MRPS9P82933 396 aaKnown RBP21.27■■□□□ 1
TOP1MT-216ENST00000522121 NEDD9Q14511 834 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 XRRA1Q6P2D8 792 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 USP17L6PQ6QN14 398 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 FANCBQ8NB91 859 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 GPKOWQ92917 476 aaPredicted RBP eCLIP21.27■■□□□ 1
TOP1MT-216ENST00000522121 NEK1Q96PY6 1258 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 CTAGE1Q96RT6 745 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 LRRC2Q9BYS8 371 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 PRDM12Q9H4Q4 367 aa21.27■■□□□ 1
TOP1MT-216ENST00000522121 BAZ2BQ9UIF8 2168 aaKnown RBP21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 FIBPO43427 364 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 CDC45O75419 566 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 ICAM3P32942 547 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 PTK7Q13308 1070 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 PCNX4Q63HM2 1172 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 LRRC8DQ7L1W4 858 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 SGMS1Q86VZ5 419 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 CMTR1Q8N1G2 835 aaKnown RBP21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 PHOSPHO2Q8TCD6 241 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 SLC9A7Q96T83 725 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 RTEL1Q9NZ71 1219 aa21.26■□□□□ 0.99
TOP1MT-216ENST00000522121 SPATA31C2B4DYI2 1134 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 MEIS2O14770 477 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 BAIAP3O94812 1187 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 RBL2Q08999 1139 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 PPP2R2DQ66LE6 453 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 NLRX1Q86UT6 975 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 MICU3Q86XE3 530 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 CCDC82Q8N4S0 544 aa21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 DHX38Q92620 1227 aaKnown RBP21.25■□□□□ 0.99
TOP1MT-216ENST00000522121 CKBP12277 381 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 METTL7BQ6UX53 244 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 TMTC3Q6ZXV5 915 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 CYFIP1Q7L576 1253 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 C16orf70Q9BSU1 422 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 USP26Q9BXU7 913 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 A0A0C4DFX4 3053 aa21.24■□□□□ 0.99
TOP1MT-216ENST00000522121 KIF28PB7ZC32 967 aa21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 H3BRB1 525 aa21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 MYOGP15173 224 aa21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 KCNJ6P48051 423 aa21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 KRT32Q14532 448 aa21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 TUT1Q9H6E5 874 aaKnown RBP21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 RBM28Q9NW13 759 aaKnown RBP21.23■□□□□ 0.99
TOP1MT-216ENST00000522121 hCG_1642624A0A1W2PR95 340 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 C17orf102A2RUQ5 167 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 LGALS2P05162 132 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 IGFBP4P22692 258 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 TSGA10IPQ3SY00 556 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 APOA5Q6Q788 366 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 DHX32Q7L7V1 743 aaKnown RBP21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 HEATR3Q7Z4Q2 680 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 GIMAP8Q8ND71 665 aaPredicted RBP21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 SENP7Q9BQF6 1050 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 BCAS3Q9H6U6 928 aa21.22■□□□□ 0.99
TOP1MT-216ENST00000522121 SPDYE3A6NKU9 549 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 HMGB1P09429 215 aaKnown RBP21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 ZNF200P98182 395 aaPredicted RBP21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 EXOSC10Q01780 885 aaKnown RBP21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 SEMA3FQ13275 785 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 CNKSR3Q6P9H4 555 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 HERC6Q8IVU3 1022 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 GPRASP2Q96D09 838 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 CDHR1Q96JP9 859 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 GPR20Q99678 358 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 ZNF215Q9UL58 517 aaPredicted RBP21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 TANC1Q9C0D5 1861 aa21.21■□□□□ 0.99
TOP1MT-216ENST00000522121 CXCL10P02778 98 aa21.2■□□□□ 0.98
TOP1MT-216ENST00000522121 CA3P07451 260 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms