RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 JPH3Q8WXH2 748 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 DPF3Q92784 378 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 TMEM169Q96HH4 297 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 FCRL2Q96LA5 508 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 KCNJ15Q99712 375 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 JAM3Q9BX67 310 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 OSBPL1AQ9BXW6 950 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 TCF7L1Q9HCS4 588 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 ATG3Q9NT62 314 aa6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 NOB1Q9ULX3 412 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-233ENST00000522052 WASHC2AQ641Q2 1341 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 PITPNM2Q9BZ72 1349 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 SLC12A8A0AV02 714 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 GOLGA6CA6NDK9 693 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 GOLGA6BA6NDN3 693 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 WTIPA6NIX2 430 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 C1QTNF9BB2RNN3 333 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 H7C1D1 291 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 FZD9O00144 591 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 TGM5O43548 720 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 MT-CO1P00395 513 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 KRT18P05783 430 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 GOLGA6DP0CG33 693 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 ZBTB48P10074 688 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 CCND1P24385 295 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 RPL10P27635 214 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 EGR3Q06889 387 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 GPR19Q15760 415 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 BROXQ5VW32 411 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 HLA-DQA1Q5Y7H0 255 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 CEP68Q76N32 757 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 OSTM1Q86WC4 334 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 Q8N1Y9 231 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 MAGEB6Q8N7X4 407 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 PMM1Q92871 262 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 LRRC4CQ9HCJ2 640 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 GOLGA6AQ9NYA3 693 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 IP6K2Q9UHH9 426 aa6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 LUC7L2Q9Y383 392 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-233ENST00000522052 TMEM265A0A087WTH1 108 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 PRPF3O43395 683 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 KRT37O76014 449 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 SNUPNO95149 360 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 AMY2AP04746 511 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 GNAT1P11488 350 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 AMY2BP19961 511 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 CEBPAP49715 358 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 JAM2P57087 298 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 RHBDL3P58872 404 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 SPIRE1Q08AE8 756 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 TERF2Q15554 542 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 GFOD2Q3B7J2 385 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 HABP4Q5JVS0 413 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 CXorf57Q6NSI4 855 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 HHIPL2Q6UWX4 724 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 ARHGAP36Q6ZRI8 547 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 PLD6Q8N2A8 252 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 C1orf162Q8NEQ5 155 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 SHKBP1Q8TBC3 707 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 ATP13A1Q9HD20 1204 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 C14orf119Q9NWQ9 140 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 SPO11Q9Y5K1 396 aa6.59□□□□□ -1.35
CTNNA1-233ENST00000522052 LOC102724159A0A0B4J2E5 919 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 PLIN1O60240 522 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 CFBP00751 764 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 U2AF1L5P0DN76 240 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 RBP3P10745 1247 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 KRT15P19012 456 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 GATA4P43694 442 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 RECQLP46063 649 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 PHC1P78364 1004 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 KRT85P78386 507 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 IRF9Q00978 393 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 U2AF1Q01081 240 aaKnown RBP eCLIP6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 UBE4AQ14139 1066 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 PWP2Q15269 919 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 ZNF174Q15697 407 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 GPR158Q5T848 1215 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 RASSF3Q86WH2 238 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 TRMT2BQ96GJ1 504 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 FAXDC2Q96IV6 333 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 MYH16Q9H6N6 1097 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 ARNT2Q9HBZ2 717 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 BTG4Q9NY30 223 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 TNFRSF10DQ9UBN6 386 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 X6R8D5 127 aa6.58□□□□□ -1.36
CTNNA1-233ENST00000522052 TCRBV5S4A2TA0A5A2 114 aa6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 DVL2O14641 736 aa6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 GSC2O15499 205 aa6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 MYL1P05976 194 aa6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 CT47B1P0C2W7 299 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 FPR2P25090 351 aa6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 LSP1P33241 339 aa6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 SMAD3P84022 425 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 INSM1Q01101 510 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 PCBP2Q15366 365 aaKnown RBP eCLIP6.57□□□□□ -1.36
CTNNA1-233ENST00000522052 SMAD2Q15796 467 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms