RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 POTEDQ86YR6 584 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 KCNH7Q9NS40 1196 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 ZHX1Q9UKY1 873 aaPredicted RBP27.4■■□□□ 1.98
PVT1-212ENST00000521951 SPATA31C2B4DYI2 1134 aa27.39■■□□□ 1.98
PVT1-212ENST00000521951 NEMFO60524 1076 aa27.39■■□□□ 1.98
PVT1-212ENST00000521951 ZNF865P0CJ78 1059 aaPredicted RBP27.39■■□□□ 1.98
PVT1-212ENST00000521951 SETQ01105 290 aaPredicted RBP27.39■■□□□ 1.98
PVT1-212ENST00000521951 CACNB2Q08289 660 aaPredicted RBP27.39■■□□□ 1.98
PVT1-212ENST00000521951 SF3A1Q15459 793 aaKnown RBP27.39■■□□□ 1.98
PVT1-212ENST00000521951 ANO1Q5XXA6 986 aa27.39■■□□□ 1.98
PVT1-212ENST00000521951 PRDM10Q9NQV6 1147 aa27.39■■□□□ 1.98
PVT1-212ENST00000521951 NRBP1Q9UHY1 535 aa27.39■■□□□ 1.98
PVT1-212ENST00000521951 RBM47A0AV96 593 aaKnown RBP27.38■■□□□ 1.97
PVT1-212ENST00000521951 MAFGO15525 162 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 FIBPO43427 364 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 CEBPZQ03701 1054 aaKnown RBP27.38■■□□□ 1.97
PVT1-212ENST00000521951 ATL3Q6DD88 541 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 C4orf32Q8N8J7 132 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 TRPV1Q8NER1 839 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 CDHR1Q96JP9 859 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 UIMC1Q96RL1 719 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 TMEM60Q9H2L4 133 aa27.38■■□□□ 1.97
PVT1-212ENST00000521951 MSH4O15457 936 aa27.37■■□□□ 1.97
PVT1-212ENST00000521951 CYBAP13498 195 aa27.37■■□□□ 1.97
PVT1-212ENST00000521951 PTGDRQ13258 359 aa27.37■■□□□ 1.97
PVT1-212ENST00000521951 SCFD2Q8WU76 684 aa27.37■■□□□ 1.97
PVT1-212ENST00000521951 TNPO1Q92973 898 aaKnown RBP27.37■■□□□ 1.97
PVT1-212ENST00000521951 MRVI1Q9Y6F6 885 aa27.37■■□□□ 1.97
PVT1-212ENST00000521951 CCDC144BQ3MJ40 725 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 ETNPPLQ8TBG4 499 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 AGO4Q9HCK5 861 aaKnown RBP27.36■■□□□ 1.97
PVT1-212ENST00000521951 KCNMB3Q9NPA1 279 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 POLR3EQ9NVU0 708 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 ATP9AO75110 1047 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 ARIH2O95376 493 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 TGFB3P10600 412 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 PRKAR2AP13861 404 aaKnown RBP27.36■■□□□ 1.97
PVT1-212ENST00000521951 ADCYAP1R1P41586 468 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 NASPP49321 788 aaPredicted RBP27.36■■□□□ 1.97
PVT1-212ENST00000521951 PTPAQ15257 358 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 CALCRLQ16602 461 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 MAP3K21Q5TCX8 1036 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 CCDC62Q6P9F0 684 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 KCNV1Q6PIU1 500 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 FBXO46Q6PJ61 603 aaPredicted RBP27.36■■□□□ 1.97
PVT1-212ENST00000521951 HAS1Q92839 578 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 MTMR9Q96QG7 549 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 PKD2L1Q9P0L9 805 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 CEP131Q9UPN4 1083 aa27.36■■□□□ 1.97
PVT1-212ENST00000521951 TBX3O15119 743 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 INHAP05111 366 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 SP2Q02086 613 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 TTLL4Q14679 1199 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 PKN2Q16513 984 aaKnown RBP27.35■■□□□ 1.97
PVT1-212ENST00000521951 IQSEC1Q6DN90 963 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 SH3TC2Q8TF17 1288 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 GJA10Q969M2 543 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 ZNF577Q9BSK1 485 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 DDX41Q9UJV9 622 aaKnown RBP27.35■■□□□ 1.97
PVT1-212ENST00000521951 CFAP45Q9UL16 551 aa27.35■■□□□ 1.97
PVT1-212ENST00000521951 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.34■■□□□ 1.97
PVT1-212ENST00000521951 IPO5O00410 1097 aaKnown RBP27.34■■□□□ 1.97
PVT1-212ENST00000521951 BMP15O95972 392 aa27.34■■□□□ 1.97
PVT1-212ENST00000521951 TXNP10599 105 aaKnown RBP27.34■■□□□ 1.97
PVT1-212ENST00000521951 KRT85P78386 507 aa27.34■■□□□ 1.97
PVT1-212ENST00000521951 ATP2C1P98194 919 aaPredicted RBP27.34■■□□□ 1.97
PVT1-212ENST00000521951 LY6KQ17RY6 165 aa27.34■■□□□ 1.97
PVT1-212ENST00000521951 TMEM63BQ5T3F8 832 aa27.34■■□□□ 1.97
PVT1-212ENST00000521951 SLC5A5Q92911 643 aa27.34■■□□□ 1.97
PVT1-212ENST00000521951 FAM20AQ96MK3 541 aa27.34■■□□□ 1.97
PVT1-212ENST00000521951 DOCK5Q9H7D0 1870 aa27.33■■□□□ 1.97
PVT1-212ENST00000521951 MARCH6O60337 910 aa27.33■■□□□ 1.97
PVT1-212ENST00000521951 BAG4O95429 457 aaKnown RBP27.33■■□□□ 1.97
PVT1-212ENST00000521951 OR52Z1P0C646 297 aa27.33■■□□□ 1.97
PVT1-212ENST00000521951 KCNA2P16389 499 aa27.33■■□□□ 1.97
PVT1-212ENST00000521951 NCLP19338 710 aaKnown RBP27.33■■□□□ 1.97
PVT1-212ENST00000521951 SLC39A14Q15043 492 aa27.33■■□□□ 1.97
PVT1-212ENST00000521951 SENP7Q9BQF6 1050 aa27.33■■□□□ 1.97
PVT1-212ENST00000521951 LAD1O00515 517 aa27.32■■□□□ 1.96
PVT1-212ENST00000521951 CCND3P30281 292 aaPredicted RBP27.32■■□□□ 1.96
PVT1-212ENST00000521951 ITGB3BPQ13352 177 aaPredicted RBP27.32■■□□□ 1.96
PVT1-212ENST00000521951 SLC9C1Q4G0N8 1177 aa27.32■■□□□ 1.96
PVT1-212ENST00000521951 LINC00301Q8NCQ3 95 aa27.32■■□□□ 1.96
PVT1-212ENST00000521951 BCAS3Q9H6U6 928 aa27.32■■□□□ 1.96
PVT1-212ENST00000521951 FAM184BQ9ULE4 1060 aa27.32■■□□□ 1.96
PVT1-212ENST00000521951 DHX15O43143 795 aaKnown RBP27.31■■□□□ 1.96
PVT1-212ENST00000521951 YEATS4O95619 227 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 SMPD1P17405 629 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 UBA1P22314 1058 aaKnown RBP27.31■■□□□ 1.96
PVT1-212ENST00000521951 TNFAIP2Q03169 654 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 STK38Q15208 465 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 SLFN12Q8IYM2 578 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 HTTP42858 3142 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 ADCY6O43306 1168 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 CNGA1P29973 690 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 TXKP42681 527 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 DUSP28Q4G0W2 176 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 COPS5Q92905 334 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 RIT2Q99578 217 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 TBC1D22BQ9NU19 505 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms