RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 MS4A14Q96JA4 679 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 NCAPGQ9BPX3 1015 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
DENND3-217ENST00000521835 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 FTCDO95954 541 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 SLC1A4P43007 532 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 MAGEA1P43355 309 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 VWA3BQ502W6 1294 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 GALNT17Q6IS24 598 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 AK8Q96MA6 479 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 TSG101Q99816 390 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
DENND3-217ENST00000521835 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 SFI1A8K8P3 1242 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
DENND3-217ENST00000521835 ZSCAN26Q16670 478 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
DENND3-217ENST00000521835 DAGLBQ8NCG7 672 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 PCDHA1Q9Y5I3 950 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
DENND3-217ENST00000521835 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
DENND3-217ENST00000521835 ESYT3A0FGR9 886 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 LAD1O00515 517 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
DENND3-217ENST00000521835 TTLL1O95922 423 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 AMPD2Q01433 879 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 COASYQ13057 564 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.25
DENND3-217ENST00000521835 FAM26FQ5R3K3 315 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
DENND3-217ENST00000521835 A0A1W2PQC6 194 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 NOP2P46087 812 aaKnown RBP13.46□□□□□ -0.25
DENND3-217ENST00000521835 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 MYOCDQ8IZQ8 938 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 RAD54LQ92698 747 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 CUL5Q93034 780 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 C7orf25Q9BPX7 421 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 FAM204AQ9H8W3 233 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
DENND3-217ENST00000521835 PCDHA13Q9Y5I0 950 aa13.46□□□□□ -0.25
DENND3-217ENST00000521835 PRPHP41219 470 aa13.46□□□□□ -0.26
DENND3-217ENST00000521835 PLS1Q14651 629 aa13.46□□□□□ -0.26
DENND3-217ENST00000521835 SND1Q7KZF4 910 aaKnown RBP eCLIP13.46□□□□□ -0.26
DENND3-217ENST00000521835 SLF2Q8IX21 1173 aa13.46□□□□□ -0.26
DENND3-217ENST00000521835 L1RE1Q9UN81 338 aa13.46□□□□□ -0.26
DENND3-217ENST00000521835 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.26
DENND3-217ENST00000521835 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 TACC1O75410 805 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 ACTN1P12814 892 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 FOXR1Q6PIV2 292 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 MYH10P35580 1976 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 HLA-DOAP06340 250 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 IFT81Q8WYA0 676 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 ANKS1AQ92625 1134 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
DENND3-217ENST00000521835 PCNTO95613 3336 aa13.45□□□□□ -0.26
DENND3-217ENST00000521835 RNF40O75150 1001 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 VAV2P52735 878 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 SEPT2Q15019 361 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 QRICH1Q2TAL8 776 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 ZNF76P36508 570 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 CDC42EP5Q6NZY7 148 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 C10orf67Q8IYJ2 551 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 GPATCH11Q8N954 259 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 CENPHQ9H3R5 247 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 ADAMTS1Q9UHI8 967 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
DENND3-217ENST00000521835 ZSCAN5CA6NGD5 496 aaPredicted RBP13.44□□□□□ -0.26
DENND3-217ENST00000521835 CLIC2O15247 247 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
DENND3-217ENST00000521835 MRPL12P52815 198 aaKnown RBP13.44□□□□□ -0.26
DENND3-217ENST00000521835 ASPRV1Q53RT3 343 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 MSANTD4Q8NCY6 345 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 TTYH3Q9C0H2 523 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 GBP3Q9H0R5 595 aa13.44□□□□□ -0.26
DENND3-217ENST00000521835 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.44□□□□□ -0.26
DENND3-217ENST00000521835 DMGDHQ9UI17 866 aaKnown RBP13.44□□□□□ -0.26
DENND3-217ENST00000521835 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.44□□□□□ -0.26
DENND3-217ENST00000521835 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
DENND3-217ENST00000521835 PSMD14O00487 310 aa13.43□□□□□ -0.26
DENND3-217ENST00000521835 CCDC172P0C7W6 258 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms