RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SLC35G1Q2M3R5 365 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 CCDC93Q567U6 631 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 EARS2Q5JPH6 523 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 TATDN1Q6P1N9 297 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 PIK3AP1Q6ZUJ8 805 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 C4orf32Q8N8J7 132 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 DCAF4Q8WV16 495 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 ZNF622Q969S3 477 aaKnown RBP eCLIP7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 MTMR8Q96EF0 704 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 PRIMPOLQ96LW4 560 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 DDX4Q9NQI0 724 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 RMND1Q9NWS8 449 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 MAN1B1Q9UKM7 699 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 PCDHA6Q9UN73 950 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 PCDHA8Q9Y5H6 950 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 MYH4Q9Y623 1939 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 NRDCO43847 1150 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 AKR1B1P15121 316 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 BAG6P46379 1132 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 NAPAP54920 295 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 GRIN1Q05586 938 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 DPYDQ12882 1025 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 TRAF1Q13077 416 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 PNOCQ13519 176 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 NOLC1Q14978 699 aaKnown RBP eCLIP7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 FKBP1CQ5VVH2 108 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 DTHD1Q6ZMT9 781 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 TMEM179Q6ZVK1 233 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 CCDC186Q7Z3E2 898 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 HEATR3Q7Z4Q2 680 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 REXO1Q8N1G1 1221 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 GMCL1P1Q8NEA9 526 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 KCNF1Q9H3M0 494 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 KANSL2Q9H9L4 492 aa7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 CUEDC1Q9NWM3 386 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-228ENST00000521640 PNMA6FA0A0J9YX94 578 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 hCG_1642624A0A1W2PR95 340 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 VWA3AA6NCI4 1184 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 TUBB4AP04350 444 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 OR52Z1P0C646 297 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 GCFC2P16383 781 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 ZNF18P17022 549 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 PICALMQ13492 652 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 KCNB1Q14721 858 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 TLR1Q15399 786 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 ZNF174Q15697 407 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 MOXD1Q6UVY6 613 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 NEK8Q86SG6 692 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 DRC7Q8IY82 874 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 CCDC112Q8NEF3 446 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 PAGE5Q96GU1 130 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 HSD3B7Q9H2F3 369 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 TTC12Q9H892 705 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 DBNDD1Q9H9R9 158 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 RIC8AQ9NPQ8 531 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 RGS17Q9UGC6 210 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
CTNNA1-228ENST00000521640 SMCO2A6NFE2 343 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 KIF2AO00139 706 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 BIN1O00499 593 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 ZBTB5O15062 677 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 CCP110O43303 1012 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 BMP6P22004 513 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 PTGS1P23219 599 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 MCM7P33993 719 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 GMPRP36959 345 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 PHKA2P46019 1235 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 ADCY7P51828 1080 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 MRPL12P52815 198 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 FANCCQ00597 558 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 SPAG1Q07617 926 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 AP3B2Q13367 1082 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 SF3B2Q13435 895 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 EZH2Q15910 746 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 C4orf17Q53FE4 359 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 COBLL1Q53SF7 1204 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 SPATA1Q5VX52 437 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 PPP4R3AQ6IN85 833 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 LRRC8AQ8IWT6 810 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 GPR161Q8N6U8 529 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 TTLL6Q8N841 843 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 SPC24Q8NBT2 197 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 DHX58Q96C10 678 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 EPSTI1Q96J88 318 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 CTAGE1Q96RT6 745 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 RAB34Q9BZG1 259 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 DNAJC18Q9H819 358 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 DISC1Q9NRI5 854 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 TMOD2Q9NZR1 351 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 HDAC9Q9UKV0 1011 aa7.55□□□□□ -1.2
CTNNA1-228ENST00000521640 BRCA1P38398 1863 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-228ENST00000521640 A0A087X0B3 334 aa7.54□□□□□ -1.2
CTNNA1-228ENST00000521640 F8W031 263 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms