RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 GLRX3O76003 335 aaKnown RBP9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 TACR1P25103 407 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 TRHRP34981 398 aaPredicted RBP9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 DNM2P50570 870 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 CYP4F8P98187 520 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 NFKB2Q00653 900 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 RIOX2Q8IUF8 465 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 POU5F2Q8N7G0 328 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 PANK1Q8TE04 598 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 EPB41L1Q9H4G0 881 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 CATSPERZQ9NTU4 200 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 FBLN5Q9UBX5 448 aa9.23□□□□□ -0.93
NUDCD1-204ENST00000521439 A0A1W2PQJ5 194 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 M0R2C6 588 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 HSP90B1P14625 803 aaKnown RBP9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 POU3F3P20264 500 aaPredicted RBP9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 SEPT7Q16181 437 aaKnown RBP9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 TMEM177Q53S58 311 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 OVCH1Q7RTY7 1134 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 KIF18BQ86Y91 864 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 AFAP1L2Q8N4X5 818 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 SHISA4Q96DD7 197 aa9.22□□□□□ -0.93
NUDCD1-204ENST00000521439 DGKIO75912 1065 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 HMGB1P09429 215 aaKnown RBP9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 GNAT1P11488 350 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 PNLIPP16233 465 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 CRY1Q16526 586 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 FAM126AQ9BYI3 521 aaPredicted RBP9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 KRTAP9-2Q9BYQ4 174 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 CRTAC1Q9NQ79 661 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 CBLCQ9ULV8 474 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 ATP8A1Q9Y2Q0 1164 aa9.21□□□□□ -0.94
NUDCD1-204ENST00000521439 LRRC10BA6NIK2 292 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 CBX4O00257 560 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 NTRK1P04629 796 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 ARL4AP40617 200 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 DHCR24Q15392 516 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 BICRALQ6AI39 1079 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 MPZL3Q6UWV2 235 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 OTOP3Q7RTS5 596 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 STRA8Q7Z7C7 330 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 CABP7Q86V35 215 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 GOLGA2P5Q9HBQ8 144 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 CABP5Q9NP86 173 aa9.2□□□□□ -0.94
NUDCD1-204ENST00000521439 TRAF5O00463 557 aa9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 CPEP16870 476 aa9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 MECP2P51608 486 aaKnown RBP9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 GPR19Q15760 415 aa9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 HABP4Q5JVS0 413 aaKnown RBP9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 WWC2Q6AWC2 1192 aa9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 SIRT2Q8IXJ6 389 aa9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 LIN37Q96GY3 246 aaPredicted RBP9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUDCD1-204ENST00000521439 FARP2O94887 1054 aaPredicted RBP9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 GLI4P10075 376 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 COL6A2P12110 1019 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 PDE6AP16499 860 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 SCNN1BP51168 640 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 GALK1P51570 392 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 STRN3Q13033 797 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 OSTM1Q86WC4 334 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 DDX42Q86XP3 938 aaKnown RBP eCLIP9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 CISD2Q8N5K1 135 aaKnown RBP9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 CHST14Q8NCH0 376 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 SLC6A20Q9NP91 592 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 B4GALT6Q9UBX8 382 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 MCM8Q9UJA3 840 aa9.18□□□□□ -0.94
NUDCD1-204ENST00000521439 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 EYA4O95677 639 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 F2P00734 622 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 MLANAQ16655 118 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 RPUSD2Q8IZ73 545 aaKnown RBP9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 C2orf69Q8N8R5 385 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 NETO2Q8NC67 525 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 PIP4K2CQ8TBX8 421 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 RNF32Q9H0A6 362 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 TNFRSF12AQ9NP84 129 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 ZKSCAN5Q9Y2L8 839 aa9.17□□□□□ -0.94
NUDCD1-204ENST00000521439 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 KRIT1O00522 736 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 SRGAP3O43295 1099 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 CDK11BP21127 795 aaKnown RBP9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 SLC6A11P48066 632 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 JAM2P57087 298 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 SART3Q15020 963 aaKnown RBP9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 ARHGAP44Q17R89 818 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 ARHGAP36Q6ZRI8 547 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 NXPE1Q8N323 547 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 ATL2Q8NHH9 583 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 KRTAP4-12Q9BQ66 201 aa9.16□□□□□ -0.94
NUDCD1-204ENST00000521439 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms