RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 A0A0U1RQG5 324 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-222ENST00000520948 ARVCFO00192 962 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 ADAMTS3O15072 1205 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 CTAGE5O15320 804 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 CLK2P49760 499 aaKnown RBP20.8■□□□□ 0.92
VEGFA-222ENST00000520948 MRPL12P52815 198 aaKnown RBP20.8■□□□□ 0.92
VEGFA-222ENST00000520948 GRIN2CQ14957 1233 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 MFSD5Q6N075 450 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 NSUN6Q8TEA1 469 aaKnown RBP20.8■□□□□ 0.92
VEGFA-222ENST00000520948 CCDC12Q8WUD4 166 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-222ENST00000520948 CUL5Q93034 780 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 VPS54Q9P1Q0 977 aa20.8■□□□□ 0.92
VEGFA-222ENST00000520948 PRUNE2Q8WUY3 3088 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-222ENST00000520948 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-222ENST00000520948 CSF2RAP15509 400 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 CUL4AQ13619 759 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 FAM126BQ8IXS8 530 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 IWS1Q96ST2 819 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 RMDN3Q96TC7 470 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 GLT8D2Q9H1C3 349 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 PXMP2Q9NR77 195 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 VCANP13611 3396 aa20.79■□□□□ 0.92
VEGFA-222ENST00000520948 FRMPD4Q14CM0 1322 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 ACRP10323 421 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 ADCY7P51828 1080 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 PPIGQ13427 754 aaKnown RBP eCLIP20.78■□□□□ 0.921e-7■■□□□ 12.5
VEGFA-222ENST00000520948 NPY5RQ15761 445 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 UBE2SQ16763 222 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 CXCL17Q6UXB2 119 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 FCHSD1Q86WN1 690 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 CCDC148Q8NFR7 591 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 WASF1Q92558 559 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 TIFAQ96CG3 184 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 PDCD2LQ9BRP1 358 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 ALG1Q9BT22 464 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 C6orf50Q9HD87 102 aa20.78■□□□□ 0.92
VEGFA-222ENST00000520948 GRXCR1A8MXD5 290 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 TLR3O15455 904 aaKnown RBP20.77■□□□□ 0.92
VEGFA-222ENST00000520948 GNA11P29992 359 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 PBX2P40425 430 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 HMGN5P82970 282 aaKnown RBP20.77■□□□□ 0.92
VEGFA-222ENST00000520948 TMEM240Q5SV17 173 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 EEPD1Q7L9B9 569 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 TLK2Q86UE8 772 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 PHF20Q9BVI0 1012 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 ZNF576Q9H609 170 aa20.77■□□□□ 0.92
VEGFA-222ENST00000520948 B4DLN1 442 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 M0R2N6 131 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 NR3C2P08235 984 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 CYP2C18P33260 490 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 PGM5Q15124 567 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 ARHGEF16Q5VV41 709 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 FBXO16Q8IX29 292 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-222ENST00000520948 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 USP38Q8NB14 1042 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 DAGLBQ8NCG7 672 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 PDGFCQ9NRA1 345 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 GJB4Q9NTQ9 266 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 PCDHA6Q9UN73 950 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 PCDHA8Q9Y5H6 950 aa20.76■□□□□ 0.91
VEGFA-222ENST00000520948 GBF1Q92538 1859 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 FOSP01100 380 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-222ENST00000520948 SMPD1P17405 629 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 EIF2AK2P19525 551 aaKnown RBP20.75■□□□□ 0.91
VEGFA-222ENST00000520948 NLRP5P59047 1200 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 TMEM63BQ5T3F8 832 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 GALNT17Q6IS24 598 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 TAPT1Q6NXT6 567 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 ZNF365Q70YC5 407 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 VSIG10LQ86VR7 867 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 MPHOSPH6Q99547 160 aaKnown RBP20.75■□□□□ 0.91
VEGFA-222ENST00000520948 TMEM260Q9NX78 707 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 PCDHA4Q9UN74 947 aa20.75■□□□□ 0.91
VEGFA-222ENST00000520948 GNEQ9Y223 722 aaKnown RBP20.75■□□□□ 0.91
VEGFA-222ENST00000520948 RBM47A0AV96 593 aaKnown RBP20.74■□□□□ 0.91
VEGFA-222ENST00000520948 K7ELQ4 463 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-222ENST00000520948 DYNC1LI2O43237 492 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-222ENST00000520948 CD4P01730 458 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 NKX3-2P78367 333 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 PDE4DQ08499 809 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 AP3B2Q13367 1082 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 STXBP2Q15833 593 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 FSCN1Q16658 493 aaKnown RBP20.74■□□□□ 0.91
VEGFA-222ENST00000520948 MCTP2Q6DN12 878 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 IL31RAQ8NI17 732 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 BICD2Q8TD16 824 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 PBX4Q9BYU1 374 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 AP5M1Q9H0R1 490 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 VTA1Q9NP79 307 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 KCNJ14Q9UNX9 436 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 UMODL1Q5DID0 1318 aa20.74■□□□□ 0.91
VEGFA-222ENST00000520948 XBP1P17861 261 aa20.73■□□□□ 0.91
VEGFA-222ENST00000520948 MRPS9P82933 396 aaKnown RBP20.73■□□□□ 0.91
VEGFA-222ENST00000520948 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
VEGFA-222ENST00000520948 PSRC1Q6PGN9 363 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-222ENST00000520948 BLIDQ8IZY5 108 aa20.73■□□□□ 0.91
VEGFA-222ENST00000520948 CRYGNQ8WXF5 182 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms