RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 IQCF3P0C7M6 154 aa23.66■■□□□ 1.38
SNHG6-203ENST00000520944 RXRAP19793 462 aa23.66■■□□□ 1.38
SNHG6-203ENST00000520944 MFSD10Q14728 455 aa23.66■■□□□ 1.38
SNHG6-203ENST00000520944 GDF6Q6KF10 455 aaPredicted RBP23.66■■□□□ 1.38
SNHG6-203ENST00000520944 FANCBQ8NB91 859 aa23.66■■□□□ 1.38
SNHG6-203ENST00000520944 CAGE1Q8TC20 777 aa23.66■■□□□ 1.38
SNHG6-203ENST00000520944 NEK1Q96PY6 1258 aa23.66■■□□□ 1.38
SNHG6-203ENST00000520944 FTOQ9C0B1 505 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNHG6-203ENST00000520944 PRUNE2Q8WUY3 3088 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 CDC45O75419 566 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 ZNF286BP0CG31 522 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 UBA1P22314 1058 aaKnown RBP23.65■■□□□ 1.38
SNHG6-203ENST00000520944 SP2Q02086 613 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 KIAA0753Q2KHM9 967 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 HSDL1Q3SXM5 330 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 CMTR1Q8N1G2 835 aaKnown RBP23.65■■□□□ 1.38
SNHG6-203ENST00000520944 CCDC82Q8N4S0 544 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 HDAC6Q9UBN7 1215 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 GTF2IRD1Q9UHL9 959 aa23.65■■□□□ 1.38
SNHG6-203ENST00000520944 F2P00734 622 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 COL9A3Q14050 684 aaPredicted RBP23.64■■□□□ 1.37
SNHG6-203ENST00000520944 USP17L6PQ6QN14 398 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 RAB11FIP4Q86YS3 637 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.64■■□□□ 1.37
SNHG6-203ENST00000520944 AFAP1L1Q8TED9 768 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 VWCEQ96DN2 955 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 PSTPIP2Q9H939 334 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 SLC28A3Q9HAS3 691 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 RTEL1Q9NZ71 1219 aa23.64■■□□□ 1.37
SNHG6-203ENST00000520944 PIK3CDO00329 1044 aa23.63■■□□□ 1.37
SNHG6-203ENST00000520944 NOP56O00567 594 aaKnown RBP23.63■■□□□ 1.37
SNHG6-203ENST00000520944 HOXD8P13378 290 aaPredicted RBP23.63■■□□□ 1.37
SNHG6-203ENST00000520944 ATP2A2P16615 1042 aaKnown RBP23.63■■□□□ 1.37
SNHG6-203ENST00000520944 MRPS9P82933 396 aaKnown RBP23.63■■□□□ 1.37
SNHG6-203ENST00000520944 NEDD9Q14511 834 aa23.63■■□□□ 1.37
SNHG6-203ENST00000520944 XRRA1Q6P2D8 792 aa23.63■■□□□ 1.37
SNHG6-203ENST00000520944 SGMS1Q86VZ5 419 aa23.63■■□□□ 1.37
SNHG6-203ENST00000520944 MICU3Q86XE3 530 aa23.63■■□□□ 1.37
SNHG6-203ENST00000520944 GPKOWQ92917 476 aaPredicted RBP eCLIP23.63■■□□□ 1.37
SNHG6-203ENST00000520944 CCDC136Q96JN2 1154 aa23.63■■□□□ 1.37
SNHG6-203ENST00000520944 FRMPD4Q14CM0 1322 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 HAS3O00219 553 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 MEIS2O14770 477 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 ICAM3P32942 547 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 KRT32Q14532 448 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 TMTC3Q6ZXV5 915 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 INPP4AQ96PE3 977 aaPredicted RBP23.62■■□□□ 1.37
SNHG6-203ENST00000520944 GAS2L1Q99501 681 aaPredicted RBP23.62■■□□□ 1.37
SNHG6-203ENST00000520944 NKX2-4Q9H2Z4 354 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 KIAA1217Q5T5P2 1943 aa23.62■■□□□ 1.37
SNHG6-203ENST00000520944 SPATA31C2B4DYI2 1134 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 FIBPO43427 364 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 SELPP16109 830 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 RABGGTBP53611 331 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 PCNX4Q63HM2 1172 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 DHX32Q7L7V1 743 aaKnown RBP23.61■■□□□ 1.37
SNHG6-203ENST00000520944 NLRX1Q86UT6 975 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 PCDHA11Q9Y5I1 949 aa23.61■■□□□ 1.37
SNHG6-203ENST00000520944 CHD9Q3L8U1 2897 aa23.6■■□□□ 1.37
SNHG6-203ENST00000520944 hCG_1642624A0A1W2PR95 340 aa23.6■■□□□ 1.37
SNHG6-203ENST00000520944 PARNO95453 639 aaKnown RBP23.6■■□□□ 1.37
SNHG6-203ENST00000520944 PTK7Q13308 1070 aa23.6■■□□□ 1.37
SNHG6-203ENST00000520944 TSGA10IPQ3SY00 556 aa23.6■■□□□ 1.37
SNHG6-203ENST00000520944 CYFIP1Q7L576 1253 aa23.6■■□□□ 1.37
SNHG6-203ENST00000520944 CTAGE1Q96RT6 745 aa23.6■■□□□ 1.37
SNHG6-203ENST00000520944 RBM28Q9NW13 759 aaKnown RBP23.6■■□□□ 1.37
SNHG6-203ENST00000520944 YBX2Q9Y2T7 364 aaKnown RBP23.6■■□□□ 1.37
SNHG6-203ENST00000520944 H3BRB1 525 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 HMGB1P09429 215 aaKnown RBP23.59■■□□□ 1.37
SNHG6-203ENST00000520944 EXOSC10Q01780 885 aaKnown RBP23.59■■□□□ 1.37
SNHG6-203ENST00000520944 APOA5Q6Q788 366 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 METTL7BQ6UX53 244 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 LRRC8DQ7L1W4 858 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 HEATR3Q7Z4Q2 680 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 C16orf70Q9BSU1 422 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 USP26Q9BXU7 913 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 PRDM12Q9H4Q4 367 aa23.59■■□□□ 1.37
SNHG6-203ENST00000520944 TUT1Q9H6E5 874 aaKnown RBP23.59■■□□□ 1.37
SNHG6-203ENST00000520944 SPDYE3A6NKU9 549 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 ZBTB43O43298 467 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 CKBP12277 381 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 FGD1P98174 961 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 RASEFQ8IZ41 740 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 GIMAP8Q8ND71 665 aaPredicted RBP23.58■■□□□ 1.37
SNHG6-203ENST00000520944 PHOSPHO2Q8TCD6 241 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 DHX38Q92620 1227 aaKnown RBP23.58■■□□□ 1.37
SNHG6-203ENST00000520944 SLC9A7Q96T83 725 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 BCAS3Q9H6U6 928 aa23.58■■□□□ 1.37
SNHG6-203ENST00000520944 BAIAP3O94812 1187 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 LGALS2P05162 132 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 RBL2Q08999 1139 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 RTN1Q16799 776 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 PPP2R2DQ66LE6 453 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 CDHR1Q96JP9 859 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 TCEANC2Q96MN5 208 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 SENP7Q9BQF6 1050 aa23.57■■□□□ 1.36
SNHG6-203ENST00000520944 C17orf102A2RUQ5 167 aa23.56■■□□□ 1.36
SNHG6-203ENST00000520944 KIF28PB7ZC32 967 aa23.56■■□□□ 1.36
SNHG6-203ENST00000520944 MYOGP15173 224 aa23.56■■□□□ 1.36
SNHG6-203ENST00000520944 KCNJ6P48051 423 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms