RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 LRRC8DQ7L1W4 858 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 SYMPKQ92797 1274 aaKnown RBP22.74■■□□□ 1.23
PABPC1-215ENST00000520804 MAP3K14Q99558 947 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 PRDM6Q9NQX0 595 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 MYO9BQ13459 2157 aa22.73■■□□□ 1.23
PABPC1-215ENST00000520804 SPTBN5Q9NRC6 3674 aaKnown RBP22.73■■□□□ 1.23
PABPC1-215ENST00000520804 CA3P07451 260 aa22.73■■□□□ 1.23
PABPC1-215ENST00000520804 UBA1P22314 1058 aaKnown RBP22.73■■□□□ 1.23
PABPC1-215ENST00000520804 ZFP91Q96JP5 570 aaPredicted RBP22.73■■□□□ 1.23
PABPC1-215ENST00000520804 SPATA33Q96N06 139 aa22.73■■□□□ 1.23
PABPC1-215ENST00000520804 MTA3Q9BTC8 594 aa22.73■■□□□ 1.23
PABPC1-215ENST00000520804 LY9Q9HBG7 655 aa22.73■■□□□ 1.23
PABPC1-215ENST00000520804 TET1Q8NFU7 2136 aa22.73■■□□□ 1.23
PABPC1-215ENST00000520804 SORBS3O60504 671 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 PARNO95453 639 aaKnown RBP22.72■■□□□ 1.23
PABPC1-215ENST00000520804 CKBP12277 381 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 TJAP1Q5JTD0 557 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 HERC6Q8IVU3 1022 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 ZNF654Q8IZM8 581 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 CTCFLQ8NI51 663 aaPredicted RBP22.72■■□□□ 1.23
PABPC1-215ENST00000520804 PIBF1Q8WXW3 757 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 GPKOWQ92917 476 aaPredicted RBP eCLIP22.72■■□□□ 1.23
PABPC1-215ENST00000520804 FRMPD4Q14CM0 1322 aa22.72■■□□□ 1.23
PABPC1-215ENST00000520804 DDAH1O94760 285 aa22.71■■□□□ 1.23
PABPC1-215ENST00000520804 PTK7Q13308 1070 aa22.71■■□□□ 1.23
PABPC1-215ENST00000520804 CCDC85BQ15834 202 aaPredicted RBP22.71■■□□□ 1.23
PABPC1-215ENST00000520804 MYL10Q9BUA6 226 aa22.71■■□□□ 1.23
PABPC1-215ENST00000520804 SPZ1Q9BXG8 430 aa22.71■■□□□ 1.23
PABPC1-215ENST00000520804 MLXIPQ9HAP2 919 aa22.71■■□□□ 1.23
PABPC1-215ENST00000520804 CHD7Q9P2D1 2997 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 PRC1O43663 620 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 STAM2O75886 525 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 CXCL10P02778 98 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 SMARCA1P28370 1054 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 KIF5BP33176 963 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 MRPS9P82933 396 aaKnown RBP22.7■■□□□ 1.22
PABPC1-215ENST00000520804 CASC1Q6TDU7 716 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 ATXN2LQ8WWM7 1075 aaKnown RBP22.7■■□□□ 1.22
PABPC1-215ENST00000520804 C16orf70Q9BSU1 422 aa22.7■■□□□ 1.22
PABPC1-215ENST00000520804 LSG1Q9H089 658 aaKnown RBP22.7■■□□□ 1.22
PABPC1-215ENST00000520804 KIF28PB7ZC32 967 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 NBNO60934 754 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 ICAM3P32942 547 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 MCM5P33992 734 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 KCNJ6P48051 423 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 ZNF200P98182 395 aaPredicted RBP22.69■■□□□ 1.22
PABPC1-215ENST00000520804 HIC1Q14526 733 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 TRIM71Q2Q1W2 868 aaKnown RBP22.69■■□□□ 1.22
PABPC1-215ENST00000520804 GNPTABQ3T906 1256 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 CNKSR3Q6P9H4 555 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 WNT8BQ93098 351 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 RRP36Q96EU6 259 aaKnown RBP22.69■■□□□ 1.22
PABPC1-215ENST00000520804 INPP4AQ96PE3 977 aaPredicted RBP22.69■■□□□ 1.22
PABPC1-215ENST00000520804 LZTS2Q9BRK4 669 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 THEGQ9P2T0 379 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 PTPRSQ13332 1948 aa22.69■■□□□ 1.22
PABPC1-215ENST00000520804 WDR5P61964 334 aaKnown RBP22.68■■□□□ 1.22
PABPC1-215ENST00000520804 TRAF7Q6Q0C0 670 aa22.68■■□□□ 1.22
PABPC1-215ENST00000520804 TMTC2Q8N394 836 aa22.68■■□□□ 1.22
PABPC1-215ENST00000520804 TMEM87BQ96K49 555 aa22.68■■□□□ 1.22
PABPC1-215ENST00000520804 BCAS3Q9H6U6 928 aa22.68■■□□□ 1.22
PABPC1-215ENST00000520804 SPATA31C2B4DYI2 1134 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 SH2B2O14492 632 aaPredicted RBP22.67■■□□□ 1.22
PABPC1-215ENST00000520804 SLC27A2O14975 620 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 GNAQP50148 359 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 TAP1Q03518 808 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 ZNF618Q5T7W0 954 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 NFXL1Q6ZNB6 911 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 ESYT1Q9BSJ8 1104 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 CERS4Q9HA82 394 aa22.67■■□□□ 1.22
PABPC1-215ENST00000520804 SEC63Q9UGP8 760 aaKnown RBP22.67■■□□□ 1.22
PABPC1-215ENST00000520804 CCDC69A6NI79 296 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 H3BRB1 525 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 RFXAPO00287 272 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 PIK3CDO00329 1044 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 FIBPO43427 364 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 TLL1O43897 1013 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 ARHGEF15O94989 841 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 LGALS2P05162 132 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 POU3F3P20264 500 aaPredicted RBP22.66■■□□□ 1.22
PABPC1-215ENST00000520804 SEMA3FQ13275 785 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 COL9A3Q14050 684 aaPredicted RBP22.66■■□□□ 1.22
PABPC1-215ENST00000520804 NEDD9Q14511 834 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 USP17L6PQ6QN14 398 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 METTL7BQ6UX53 244 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 SRBD1Q8N5C6 995 aaKnown RBP22.66■■□□□ 1.22
PABPC1-215ENST00000520804 SMARCC2Q8TAQ2 1214 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 CUL5Q93034 780 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 ASB2Q96Q27 587 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 TUT1Q9H6E5 874 aaKnown RBP22.66■■□□□ 1.22
PABPC1-215ENST00000520804 RTEL1Q9NZ71 1219 aa22.66■■□□□ 1.22
PABPC1-215ENST00000520804 ABHD14A-ACY1A0A1B0GW23 586 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 NOP56O00567 594 aaKnown RBP22.65■■□□□ 1.22
PABPC1-215ENST00000520804 MEIS2O14770 477 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 PLEKHA8P1O95397 391 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 LIFRP42702 1097 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 DEFB103AP81534 67 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 MBTPS1Q14703 1052 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 NECTIN1Q15223 517 aa22.65■■□□□ 1.22
PABPC1-215ENST00000520804 TCTN1Q2MV58 587 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms