RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 FAM160A1Q05DH4 1040 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 MAP2K5Q13163 448 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 KIF22Q14807 665 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 ZNF792Q3KQV3 632 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 LRCH2Q5VUJ6 765 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 ZNF467Q7Z7K2 595 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 CYP2W1Q8TAV3 490 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 SYMPKQ92797 1274 aaKnown RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 HAS1Q92839 578 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 INPP4AQ96PE3 977 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 NUDT12Q9BQG2 462 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 PYM1Q9BRP8 204 aaKnown RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 TEKT3Q9BXF9 490 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 CFHR5Q9BXR6 569 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 WDR11Q9BZH6 1224 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 GOLPH3LQ9H4A5 285 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 DDX19AQ9NUU7 478 aaKnown RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 LRWD1Q9UFC0 647 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 PCDHA12Q9UN75 941 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 DIS3Q9Y2L1 958 aaKnown RBP10.1□□□□□ -0.79
CSMD1-208ENST00000520561 STK24Q9Y6E0 443 aa10.1□□□□□ -0.79
CSMD1-208ENST00000520561 PLXNA1Q9UIW2 1896 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 FAM237AA0A1B0GTK4 181 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 A0A1B0GVL5 298 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 IPO5O00410 1097 aaKnown RBP10.09□□□□□ -0.79
CSMD1-208ENST00000520561 MAFGO15525 162 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 COBLO75128 1261 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 TRPA1O75762 1119 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 TBC1D8O95759 1140 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 ARP10275 920 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 LIG1P18858 919 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 RGS2P41220 211 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 UBA7P41226 1012 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 NDUFA8P51970 172 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 LACTBP83111 547 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-208ENST00000520561 IL17AQ16552 155 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 SPECC1Q5M775 1068 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 HAUS3Q68CZ6 603 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 CAVIN1Q6NZI2 390 aaKnown RBP10.09□□□□□ -0.79
CSMD1-208ENST00000520561 IGSF22Q8N9C0 903 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 ERMNQ8TAM6 284 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 SNX29Q8TEQ0 813 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 SLC5A5Q92911 643 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 CCDC34Q96HJ3 373 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 CDK5RAP3Q96JB5 506 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 FGD4Q96M96 766 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 RIT2Q99578 217 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 APBA2Q99767 749 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
CSMD1-208ENST00000520561 KCNH7Q9NS40 1196 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 RNF186Q9NXI6 227 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 SAGE1Q9NXZ1 904 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 DACT1Q9NYF0 836 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 CCDC39Q9UFE4 941 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 KCNH3Q9ULD8 1083 aa10.09□□□□□ -0.79
CSMD1-208ENST00000520561 KDM3AQ9Y4C1 1321 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 POTEMA6NI47 508 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 C1QTNF8P60827 252 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 SP3Q02447 781 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 PDIA5Q14554 519 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 MORN1Q5T089 497 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 CCDC183Q5T5S1 534 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 NCAPH2Q6IBW4 605 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 ARMCX2Q7L311 632 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 CABP7Q86V35 215 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 FMR1NBQ8N0W7 255 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-208ENST00000520561 MSL3Q8N5Y2 521 aaKnown RBP10.08□□□□□ -0.8
CSMD1-208ENST00000520561 MORC4Q8TE76 937 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 GJA10Q969M2 543 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 CALML4Q96GE6 196 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 UIMC1Q96RL1 719 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 SDF4Q9BRK5 362 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 BEGAINQ9BUH8 593 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 NUP62CLQ9H1M0 184 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 TBC1D22BQ9NU19 505 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 VAV3Q9UKW4 847 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 HPSEQ9Y251 543 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 MGAMO43451 1857 aa10.08□□□□□ -0.8
CSMD1-208ENST00000520561 NFASCO94856 1347 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 PP2D1A8MPX8 630 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 DDX39AO00148 427 aaKnown RBP10.07□□□□□ -0.8
CSMD1-208ENST00000520561 SLC26A4O43511 780 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 CHMP2AO43633 222 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 NR1I2O75469 434 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 PSMD10O75832 226 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 HOXC6P09630 235 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 ICAM3P32942 547 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 STAT6P42226 847 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 PSMC4P43686 418 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 KRT76Q01546 638 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 MAP2K1Q02750 393 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-208ENST00000520561 SEMA3FQ13275 785 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 PPP2R5CQ13362 524 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 ZRSR1Q15695 479 aaKnown RBP10.07□□□□□ -0.8
CSMD1-208ENST00000520561 KCNV1Q6PIU1 500 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms