RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ZNF444Q8N0Y2 327 aaPredicted RBP9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 NSUN7Q8NE18 718 aaKnown RBP9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 TTC9Q92623 222 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 UBAC1Q9BSL1 405 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 EHD4Q9H223 541 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 DHX36Q9H2U1 1008 aaKnown RBP9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 MKNK2Q9HBH9 465 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 MYOZ2Q9NPC6 264 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 TCP11L1Q9NUJ3 509 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 CXXC1Q9P0U4 656 aaPredicted RBP9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 PGAP2Q9UHJ9 254 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 CNOT7Q9UIV1 285 aaKnown RBP9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
CTHRC1-203ENST00000520337 MYH15Q9Y2K3 1946 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 NID2Q14112 1375 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 ATAD5Q96QE3 1844 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 CCDC69A6NI79 296 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 TSPY2A6NKD2 308 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 ZBTB43O43298 467 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 SASH3O75995 380 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 RXRAP19793 462 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 CDC27P30260 824 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 NOVP48745 357 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 RCAN1P53805 252 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 NRLP54845 237 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 NUCB2P80303 420 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 NFXL1Q6ZNB6 911 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 KRT25Q7Z3Z0 450 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 IQCA1Q86XH1 822 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 FOXP4Q8IVH2 680 aaPredicted RBP9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 GPC2Q8N158 579 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 DTWD1Q8N5C7 304 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 MYL10Q9BUA6 226 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 DNAJC18Q9H819 358 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 PI4KBQ9UBF8 816 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 SWAP70Q9UH65 585 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 SERPINB13Q9UIV8 391 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 NAP1L2Q9ULW6 460 aaPredicted RBP9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 SLC12A7Q9Y666 1083 aa9.15□□□□□ -0.94
CTHRC1-203ENST00000520337 IGKV6D-41A0A0C4DH26 115 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 ERICH2A1L162 156 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 TCP10L2B9ZVM9 353 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 XYLBO75191 536 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 BRD1O95696 1058 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 HLA-DOAP06340 250 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 FDPSP14324 419 aaKnown RBP9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 CPB1P15086 417 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 SYT1P21579 422 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 TROAPQ12815 778 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 DOC2BQ14184 412 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 NTRK3Q16288 839 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 IFIT1BQ5T764 474 aaKnown RBP9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 TMEM164Q5U3C3 297 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 FAM83AQ86UY5 434 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 DGKHQ86XP1 1220 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 RGL4Q8IZJ4 473 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 ZNF654Q8IZM8 581 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 FAM151AQ8WW52 585 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 TNPO1Q92973 898 aaKnown RBP9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 CHMP4CQ96CF2 233 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 LPIN3Q9BQK8 851 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 FAM13BQ9NYF5 915 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 GPRC5DQ9NZD1 345 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 TMOD2Q9NZR1 351 aa9.14□□□□□ -0.95
CTHRC1-203ENST00000520337 PLIN4Q96Q06 1357 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 ASTN2O75129 1339 aaPredicted RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 PTPDC1A2A3K4 754 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 ZBTB42B2RXF5 422 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 DHX16O60231 1041 aaKnown RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 TSPY3P0CV98 308 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 TSPY8P0CW00 308 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 AKR1B1P15121 316 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 METAP2P50579 478 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 NRG1Q02297 640 aaPredicted RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 RRP1BQ14684 758 aaKnown RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 NFKBIBQ15653 356 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 GRIK4Q16099 956 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 TBC1D10BQ4KMP7 808 aaPredicted RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 CCDC178Q5BJE1 867 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 C9orf131Q5VYM1 1079 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 TATDN1Q6P1N9 297 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 ELMSAN1Q6PJG2 1045 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 CLEC17AQ6ZS10 378 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 MICU3Q86XE3 530 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 CCDC144CPQ8IYA2 1237 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 CMTR1Q8N1G2 835 aaKnown RBP9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 FANCBQ8NB91 859 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 DDX11Q96FC9 970 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 RNF181Q9P0P0 153 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 MTMR6Q9Y217 621 aa9.13□□□□□ -0.95
CTHRC1-203ENST00000520337 GOLGA8AA7E2F4 631 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 H7C1D1 291 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 STX6O43752 255 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 MYO1BO43795 1136 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 DDAH1O94760 285 aa9.12□□□□□ -0.95
CTHRC1-203ENST00000520337 DDNO94850 711 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms