RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GNAT1P11488 350 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 RAB27AP51159 221 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 TBX4P57082 545 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 ERVK-21P61565 698 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 RASSF7Q02833 373 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 AOC3Q16853 763 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 PLA2G4EQ3MJ16 856 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 SLCO6A1Q86UG4 719 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 RIOX2Q8IUF8 465 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 SLC5A5Q92911 643 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 TRMT2BQ96GJ1 504 aaKnown RBP7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 HHIPL1Q96JK4 782 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 KCNJ15Q99712 375 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 CDH19Q9H159 772 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 SMURF1Q9HCE7 757 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 COA3Q9Y2R0 106 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 CCDC194A0A1B0GVG4 234 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 H7C1D1 291 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 KIF3BO15066 747 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 PRC1O43663 620 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 SCGB1D2O95969 90 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 ITGB2P05107 769 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 PHC1P78364 1004 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 NKAPLQ5M9Q1 402 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 MROH9Q5TGP6 573 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 OTOP3Q7RTS5 596 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 STK11IPQ8N1F8 1099 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 TSR2Q969E8 191 aaKnown RBP7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 JAM3Q9BX67 310 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 AASDHPPTQ9NRN7 309 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZIM2Q9NZV7 527 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 SPO11Q9Y5K1 396 aa7.09□□□□□ -1.27
HMGB1P46-201ENST00000520062 TNKSO95271 1327 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 DGKIO75912 1065 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 AMY2AP04746 511 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZBTB48P10074 688 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 AMY2BP19961 511 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 GSK3AP49840 483 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 KRT85P78386 507 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 KLF1Q13351 362 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 DDB1Q16531 1140 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 INAVAQ3KP66 663 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 GPR158Q5T848 1215 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 HDGFL2Q7Z4V5 671 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 OSTM1Q86WC4 334 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 CHPFQ8IZ52 775 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 CBARPQ8N350 705 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 CLRN3Q8NCR9 226 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 PLEKHO2Q8TD55 490 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 HOOK2Q96ED9 719 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 AHCYL2Q96HN2 611 aaKnown RBP7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 JMJD8Q96S16 334 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 MTA3Q9BTC8 594 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 SLC13A1Q9BZW2 595 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 BTG4Q9NY30 223 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 MARCH2Q9P0N8 246 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 GULP1Q9UBP9 304 aa7.08□□□□□ -1.28
HMGB1P46-201ENST00000520062 C22orf46C9J442 243 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 RFPL1O75677 317 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 FPR2P25090 351 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 JAM2P57087 298 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 IRF9Q00978 393 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 IKZF1Q13422 519 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZNF174Q15697 407 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 MSMPQ1L6U9 139 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 FIGNQ5HY92 759 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 NXNQ6DKJ4 435 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 CCSAPQ6IQ19 270 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 CYP4F22Q6NT55 531 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 ARHGAP36Q6ZRI8 547 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 TEX2Q8IWB9 1127 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 NLGN4XQ8N0W4 816 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 ANKS4BQ8N8V4 417 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 ASIC4Q96FT7 647 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 SLC6A20Q9NP91 592 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 BSDC1Q9NW68 430 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 NUB1Q9Y5A7 615 aa7.07□□□□□ -1.28
HMGB1P46-201ENST00000520062 WASHC2AQ641Q2 1341 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 KRIT1O00522 736 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 TGM5O43548 720 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 PPP1R11O60927 126 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 ABLIM3O94929 683 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZGLP1P0C6A0 271 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 CHRNEQ04844 493 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 DOC2BQ14184 412 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 HLTFQ14527 1009 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 LRRC41Q15345 812 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 TERF2Q15554 542 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 RSPO4Q2I0M5 234 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 BROXQ5VW32 411 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 NOSTRINQ8IVI9 506 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 WDR75Q8IWA0 830 aaKnown RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 CCAR1Q8IX12 1150 aaKnown RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 MYO1HQ8N1T3 1032 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 LZTR1Q8N653 840 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 CARS2Q9HA77 564 aaKnown RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 TCF7L1Q9HCS4 588 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 SLC52A1Q9NWF4 448 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms