RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 GIMAP8Q8ND71 665 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-212ENST00000519661 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-212ENST00000519661 NR2E3Q9Y5X4 410 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-212ENST00000519661 EDIL3O43854 480 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 ZEB2O60315 1214 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 PPFIA4O75335 1185 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 SP2Q02086 613 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 NEDD9Q14511 834 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 BRDTQ58F21 947 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-212ENST00000519661 MOXD1Q6UVY6 613 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 WASF1Q92558 559 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 SENP6Q9GZR1 1112 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-212ENST00000519661 JADE2Q9NQC1 790 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
SPIDR-212ENST00000519661 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-212ENST00000519661 HAS3O00219 553 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 F2P00734 622 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 MMP3P08254 477 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 KCNA2P16389 499 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 HOXC8P31273 242 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 MCM2P49736 904 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 USP11P51784 963 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-212ENST00000519661 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-212ENST00000519661 LY6KQ17RY6 165 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 NLRX1Q86UT6 975 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 MBOAT7Q96N66 472 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 MXRA8Q9BRK3 442 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
SPIDR-212ENST00000519661 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 VPS54Q9P1Q0 977 aa13.18□□□□□ -0.3
SPIDR-212ENST00000519661 NFASCO94856 1347 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 ARVCFO00192 962 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 KIAA0355O15063 1070 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 ST18O60284 1047 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 EVI5O60447 810 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 CD4P01730 458 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-212ENST00000519661 KCNA4P22459 653 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 PTGS1P23219 599 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 CYP3A7P24462 503 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 RTP1P59025 263 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 STK3Q13188 491 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 FAM126BQ8IXS8 530 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 KAT2BQ92831 832 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 COPS5Q92905 334 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 LENG9Q96B70 501 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 MTG1Q9BT17 334 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-212ENST00000519661 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
SPIDR-212ENST00000519661 XBP1P17861 261 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 BMP8BP34820 402 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
SPIDR-212ENST00000519661 BEX3Q00994 111 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 SETQ01105 290 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-212ENST00000519661 MTMR1Q13613 665 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 DGKDQ16760 1214 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 BLIDQ8IZY5 108 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
SPIDR-212ENST00000519661 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-212ENST00000519661 A0A1W2PPC1 479 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 H0YGN5 161 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 GGPS1O95749 300 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 TLE2Q04725 743 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 RBL2Q08999 1139 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
SPIDR-212ENST00000519661 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
SPIDR-212ENST00000519661 GPR20Q99678 358 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 GDF15Q99988 308 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 TMEM260Q9NX78 707 aa13.15□□□□□ -0.3
SPIDR-212ENST00000519661 IGKV6D-21A0A0A0MT36 114 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms